RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 SPRY4Q9C004 299 aa4.74□□□□□ -1.65
USP25-207ENST00000464435 HRH4Q9H3N8 390 aa4.74□□□□□ -1.65
USP25-207ENST00000464435 SEBOXQ9HB31 216 aaPredicted RBP4.74□□□□□ -1.65
USP25-207ENST00000464435 MMP25Q9NPA2 562 aa4.74□□□□□ -1.65
USP25-207ENST00000464435 LTB4R2Q9NPC1 389 aa4.74□□□□□ -1.65
USP25-207ENST00000464435 MTMR10Q9NXD2 777 aa4.74□□□□□ -1.65
USP25-207ENST00000464435 COPG2Q9UBF2 871 aa4.74□□□□□ -1.65
USP25-207ENST00000464435 SEC63Q9UGP8 760 aaKnown RBP4.74□□□□□ -1.65
USP25-207ENST00000464435 FAM169AQ9Y6X4 670 aa4.74□□□□□ -1.65
USP25-207ENST00000464435 INAFM1C9JVW0 142 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 WNT9BO14905 357 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 ADAMDEC1O15204 470 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 MITFO75030 526 aaPredicted RBP4.73□□□□□ -1.65
USP25-207ENST00000464435 KCNK5O95279 499 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 ICAM1P05362 532 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 MMP9P14780 707 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 NAGAP17050 411 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 GPTP24298 496 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 SUOXP51687 545 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 MRPS34P82930 218 aaKnown RBP4.73□□□□□ -1.65
USP25-207ENST00000464435 ZBED6P86452 979 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 ECT2LQ008S8 904 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 GPS2Q13227 327 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 FNBP1LQ5T0N5 605 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 ZNF280DQ6N043 979 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 RPUSD3Q6P087 351 aaKnown RBP4.73□□□□□ -1.65
USP25-207ENST00000464435 DENND5BQ6ZUT9 1274 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 PRPF39Q86UA1 669 aaKnown RBP4.73□□□□□ -1.65
USP25-207ENST00000464435 SCYL3Q8IZE3 742 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 KCTD6Q8NC69 237 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 OR8K5Q8NH50 307 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 PRPF31Q8WWY3 499 aaKnown RBP4.73□□□□□ -1.65
USP25-207ENST00000464435 RND1Q92730 232 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 GRAMD2BQ96HH9 432 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 HARBI1Q96MB7 349 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 TEX12Q9BXU0 123 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 KLHL4Q9C0H6 718 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 CNGB3Q9NQW8 809 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 ACSS1Q9NUB1 689 aaPredicted RBP4.73□□□□□ -1.65
USP25-207ENST00000464435 TINAGQ9UJW2 476 aa4.73□□□□□ -1.65
USP25-207ENST00000464435 RPS10-NUDT3A0A1W2PQS6 291 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 GLOD5A6NK44 160 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 SPRY3O43610 288 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 VNN2O95498 520 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 EGFP01133 1207 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 SAT1P21673 171 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 HOXC9P31274 260 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 RPL3P39023 403 aaKnown RBP4.72□□□□□ -1.65
USP25-207ENST00000464435 MXI1P50539 228 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 GPR143P51810 404 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 KRTAP10-6P60371 365 aaPredicted RBP4.72□□□□□ -1.65
USP25-207ENST00000464435 MRPS5P82675 430 aaKnown RBP4.72□□□□□ -1.65
USP25-207ENST00000464435 RASA2Q15283 850 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 DLG2Q15700 870 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 PNLIPRP3Q17RR3 467 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 TMEM266Q2M3C6 531 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 ZNF805Q5CZA5 627 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 PAPPA-AS1Q5QFB9 102 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 DNTTIP2Q5QJE6 756 aaKnown RBP4.72□□□□□ -1.65
USP25-207ENST00000464435 OTUD1Q5VV17 481 aaPredicted RBP4.72□□□□□ -1.65
USP25-207ENST00000464435 GARNL3Q5VVW2 1013 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 GGNBP1Q5YKI7 109 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 GPR139Q6DWJ6 353 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 SIGIRRQ6IA17 410 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 DLK2Q6UY11 383 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 CCDC191Q8NCU4 936 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 OR2AK2Q8NG84 335 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 TRPC4APQ8TEL6 797 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 OIT3Q8WWZ8 545 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 FIZ1Q96SL8 496 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 NOX4Q9NPH5 578 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 GIMAP4Q9NUV9 329 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 ZNF580Q9UK33 172 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 FBXW11Q9UKB1 542 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 PLAGL1Q9UM63 463 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 PTGDR2Q9Y5Y4 395 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 ARHGEF40Q8TER5 1519 aa4.72□□□□□ -1.65
USP25-207ENST00000464435 IGHV4-28A0A0C4DH34 117 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 A0A1B0GVM2 712 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 LNP1A1A4G5 178 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 VWA5AO00534 786 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 UBE2CO00762 179 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 SMAD6O43541 496 aaKnown RBP4.71□□□□□ -1.66
USP25-207ENST00000464435 NDUFS7O75251 213 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 TRIM21P19474 475 aaKnown RBP4.71□□□□□ -1.66
USP25-207ENST00000464435 UBA1P22314 1058 aaKnown RBP4.71□□□□□ -1.66
USP25-207ENST00000464435 CDC25AP30304 524 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 PRCPP42785 496 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 RFX2P48378 723 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 PPP5CP53041 499 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 NUDT6P53370 316 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 PNLIPRP2P54317 469 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 RRP1P56182 461 aaKnown RBP4.71□□□□□ -1.66
USP25-207ENST00000464435 ABATP80404 500 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 SPOCK1Q08629 439 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 SREBF2Q12772 1141 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 CDC16Q13042 620 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 FSCBQ5H9T9 825 aa4.71□□□□□ -1.66
USP25-207ENST00000464435 RARS2Q5T160 578 aaKnown RBP4.71□□□□□ -1.66
USP25-207ENST00000464435 TYW3Q6IPR3 259 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms