RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 NRSN1Q8IZ57 195 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 ZNF567Q8N184 647 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 CBARPQ8N350 705 aaPredicted RBP15.32■□□□□ 0.04
VARS-219ENST00000461328 FAM46DQ8NEK8 389 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 HNRNPLLQ8WVV9 542 aaKnown RBP15.32■□□□□ 0.04
VARS-219ENST00000461328 TRIB3Q96RU7 358 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 RIOK2Q9BVS4 552 aaKnown RBP15.32■□□□□ 0.04
VARS-219ENST00000461328 FSD1LQ9BXM9 530 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 GPR63Q9BZJ6 419 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 TMEM168Q9H0V1 697 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 C10orf88Q9H8K7 445 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 RALYQ9UKM9 306 aaKnown RBP15.32■□□□□ 0.04
VARS-219ENST00000461328 LHX6Q9UPM6 363 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 SHOC2Q9UQ13 582 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 ZNF711Q9Y462 761 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 LRP4O75096 1905 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 ANKRD11Q6UB99 2663 aaPredicted RBP15.32■□□□□ 0.04
VARS-219ENST00000461328 WDFY3Q8IZQ1 3526 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 KNTC1P50748 2209 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 CFAP47Q6ZTR5 3102 aa15.32■□□□□ 0.04
VARS-219ENST00000461328 INPP4BO15327 924 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 KCNN4O15554 427 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 BRINP1O60477 761 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 USP12O75317 370 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 CCDC175P0C221 793 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 RBP3P10745 1247 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 TEAD1P28347 426 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 GNPDA1P46926 289 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 SPINT3P49223 89 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 WNT3AP56704 352 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 ISXQ2M1V0 245 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 SEL1L2Q5TEA6 688 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 ALS2CLQ60I27 953 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 ADAMTSL4Q6UY14 1074 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 RBM44Q6ZP01 1051 aaKnown RBP15.31■□□□□ 0.04
VARS-219ENST00000461328 TRIM74Q86UV6 250 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 IPMKQ8NFU5 416 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 WDR48Q8TAF3 677 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 ALS2CR12Q96Q35 445 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 ZFYVE1Q9HBF4 777 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 APC2O95996 2303 aa15.31■□□□□ 0.04
VARS-219ENST00000461328 DDX3YO15523 660 aaKnown RBP15.3■□□□□ 0.04
VARS-219ENST00000461328 TCEA3O75764 348 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 MPOP05164 745 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 CEACAM5P06731 702 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 ACTN2P35609 894 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 GABREP78334 506 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 ILF3Q12906 894 aaKnown RBP eCLIP15.3■□□□□ 0.04
VARS-219ENST00000461328 SPIDRQ14159 915 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 LRRC8AQ8IWT6 810 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 SLC25A41Q8N5S1 370 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 TTC13Q8NBP0 860 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 OR6C4Q8NGE1 309 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 CCL4L1Q8NHW4 92 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 CCDC74AQ96AQ1 378 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 TADA1Q96BN2 335 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 FCRL5Q96RD9 977 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 SRPK1Q96SB4 655 aaKnown RBP15.3■□□□□ 0.04
VARS-219ENST00000461328 AGAP2Q99490 1192 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 FRMD8Q9BZ67 464 aaPredicted RBP15.3■□□□□ 0.04
VARS-219ENST00000461328 GBA3Q9H227 469 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 DPEP2Q9H4A9 486 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 FAM83DQ9H4H8 585 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 GRPEL1Q9HAV7 217 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 LZTFL1Q9NQ48 299 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 CHD6Q8TD26 2715 aa15.3■□□□□ 0.04
VARS-219ENST00000461328 ACACAQ13085 2346 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 A0A087WV48 116 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 RGSL1A5PLK6 1076 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 GOLGA6L3A6NEY3 463 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 B4DGG1 531 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 TLX3O43711 291 aaPredicted RBP15.29■□□□□ 0.04
VARS-219ENST00000461328 ZNF189O75820 626 aaPredicted RBP15.29■□□□□ 0.04
VARS-219ENST00000461328 ASMTLO95671 621 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 SOD1P00441 154 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 POLD2P49005 469 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 GEMP55040 296 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 MPP3Q13368 585 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 PRPSAP1Q14558 356 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 COL28A1Q2UY09 1125 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 KDELC1Q6UW63 502 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 MARK2Q7KZI7 788 aaKnown RBP15.29■□□□□ 0.04
VARS-219ENST00000461328 RAVER1Q8IY67 606 aaKnown RBP15.29■□□□□ 0.04
VARS-219ENST00000461328 GPR156Q8NFN8 814 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 GRAMD1AQ96CP6 724 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 ATXN7L3BQ96GX2 97 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 OXNAD1Q96HP4 312 aaPredicted RBP15.29■□□□□ 0.04
VARS-219ENST00000461328 HES6Q96HZ4 224 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 HIC2Q96JB3 615 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 SPATA16Q9BXB7 569 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 GSDMCQ9BYG8 508 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 MAGEE1Q9HCI5 957 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 RAD18Q9NS91 495 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 SUFUQ9UMX1 484 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 TMEM98Q9Y2Y6 226 aa15.29■□□□□ 0.04
VARS-219ENST00000461328 DSPP15924 2871 aaKnown RBP15.29■□□□□ 0.04
VARS-219ENST00000461328 RRP8O43159 456 aaKnown RBP15.28■□□□□ 0.04
VARS-219ENST00000461328 ANXA9O76027 345 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 IVLP07476 585 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 GLB1P16278 677 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms