RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 PMS2P1A4D2B8 440 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 INPP4BO15327 924 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 NUDT21O43809 227 aaKnown RBP18.81■□□□□ 0.6
COL5A1-203ENST00000460264 PNLIPP16233 465 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 ITPKBP27987 946 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 ADCY8P40145 1251 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 ERVPABLB-1P60509 514 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 CTBSQ01459 385 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 TEX44Q53QW1 395 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 HENMT1Q5T8I9 393 aaKnown RBP18.81■□□□□ 0.6
COL5A1-203ENST00000460264 SLC30A9Q6PML9 568 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 LRRC69Q6ZNQ3 347 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 BZW1Q7L1Q6 419 aaKnown RBP18.81■□□□□ 0.6
COL5A1-203ENST00000460264 LYSMD3Q7Z3D4 306 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 B3GNT8Q7Z7M8 397 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 DAAM2Q86T65 1068 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 C17orf82Q86X59 251 aaPredicted RBP18.81■□□□□ 0.6
COL5A1-203ENST00000460264 TMTC1Q8IUR5 882 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 RCOR2Q8IZ40 523 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 EXD1Q8NHP7 514 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 SPATA22Q8NHS9 363 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 CCHCR1Q8TD31 782 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 ZDHHC1Q8WTX9 485 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 TFB1MQ8WVM0 346 aaKnown RBP18.81■□□□□ 0.6
COL5A1-203ENST00000460264 KRT35Q92764 455 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 CRELD1Q96HD1 420 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 OR2M4Q96R27 311 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 LRRN3Q9H3W5 708 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 GLOD4Q9HC38 313 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 PKD2L2Q9NZM6 624 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 PCDHGA8Q9Y5G5 932 aa18.81■□□□□ 0.6
COL5A1-203ENST00000460264 EPN1Q9Y6I3 576 aaPredicted RBP18.81■□□□□ 0.6
COL5A1-203ENST00000460264 RGSL1A5PLK6 1076 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 RCCD1A6NED2 376 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 ZRANB2O95218 330 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 MT-CYBP00156 380 aaPredicted RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 FGF1P05230 155 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 MAZP56270 477 aaKnown RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 PCBP4P57723 403 aaKnown RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 WASHC5Q12768 1159 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 PCSK7Q16549 785 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 MARK2Q7KZI7 788 aaKnown RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 KDELC2Q7Z4H8 507 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 SPRED1Q7Z699 444 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 GAS2L3Q86XJ1 694 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 CCDC50Q8IVM0 306 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 Q8N9G6 341 aaPredicted RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 P3H4Q92791 437 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 EID2BQ96D98 161 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 LIN37Q96GY3 246 aaPredicted RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 PRR11Q96HE9 360 aaPredicted RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 RBM41Q96IZ5 413 aaKnown RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 TEKT5Q96M29 485 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 FAM83DQ9H4H8 585 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 THSD1Q9NS62 852 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 LRIT1Q9P2V4 623 aa18.8■□□□□ 0.6
COL5A1-203ENST00000460264 CNOT6Q9ULM6 557 aaKnown RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 REXO2Q9Y3B8 237 aaKnown RBP18.8■□□□□ 0.6
COL5A1-203ENST00000460264 CCDC187A0A096LP49 1063 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 FADS2P1A8MWK0 482 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 MTSS1O43312 755 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 PIRTP0C851 137 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 CDK18Q07002 472 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 CCDC173Q0VFZ6 552 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 PPP2R5EQ16537 467 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 PYCR3Q53H96 274 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 ZNF438Q7Z4V0 828 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 ZC3H18Q86VM9 953 aaKnown RBP18.79■□□□□ 0.6
COL5A1-203ENST00000460264 WDR36Q8NI36 951 aaKnown RBP18.79■□□□□ 0.6
COL5A1-203ENST00000460264 HAUS1Q96CS2 278 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 FOXP3Q9BZS1 431 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 MAGEE1Q9HCI5 957 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 VPS18Q9P253 973 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 PLEKHM1Q9Y4G2 1056 aa18.79■□□□□ 0.6
COL5A1-203ENST00000460264 OAS3Q9Y6K5 1087 aaKnown RBP18.79■□□□□ 0.6
COL5A1-203ENST00000460264 LOC400499M0QZD8 3231 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 BPTFQ12830 3046 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 PMPCBO75439 489 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 IPO7O95373 1038 aaKnown RBP18.78■□□□□ 0.6
COL5A1-203ENST00000460264 ECEL1O95672 775 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 NDST3O95803 873 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 ATP1A1P05023 1023 aaKnown RBP18.78■□□□□ 0.6
COL5A1-203ENST00000460264 CD68P34810 354 aaPredicted RBP18.78■□□□□ 0.6
COL5A1-203ENST00000460264 ACTR1BP42025 376 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 DCDC1P59894 354 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 ACTR1AP61163 376 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 RAD9BQ6WBX8 426 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 BBS12Q6ZW61 710 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 GALNT13Q8IUC8 556 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 ZNF248Q8NDW4 579 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 PATE1Q8WXA2 126 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 SLC46A1Q96NT5 459 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 QKIQ96PU8 341 aaKnown RBP eCLIP18.78■□□□□ 0.6
COL5A1-203ENST00000460264 ZFYVE1Q9HBF4 777 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 EPB41L5Q9HCM4 733 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 UBP1Q9NZI7 540 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 SHOC2Q9UQ13 582 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 ZNF711Q9Y462 761 aa18.78■□□□□ 0.6
COL5A1-203ENST00000460264 PCYT1BQ9Y5K3 369 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms