RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	OAS3	Q9Y6K5	1087 aa	Known RBP	13.1	□□□□□ -0.31
SNHG17-208	ENST00000456953	ADGRG4	Q8IZF6	3080 aa		13.1	□□□□□ -0.31
SNHG17-208	ENST00000456953		J3KR12	359 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	FGF10	O15520	208 aa	Predicted RBP	13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	MAP3K6	O95382	1288 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	RECK	O95980	971 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	TPM1	P09493	284 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	UCHL3	P15374	230 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	PGD	P52209	483 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	POLR2F	P61218	127 aa	Known RBP	13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	LRP8	Q14114	963 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	LYSMD3	Q7Z3D4	306 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	SLFN11	Q7Z7L1	901 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	VSTM4	Q8IW00	320 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	PYROXD2	Q8N2H3	581 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	TSEN2	Q8NCE0	465 aa	Known RBP	13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	SPOCK2	Q92563	424 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	DTD2	Q96FN9	168 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	OR2M4	Q96R27	311 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	LRRC19	Q9H756	370 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	SIDT1	Q9NXL6	827 aa	Known RBP	13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	DONSON	Q9NYP3	566 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	PLEKHM1	Q9Y4G2	1056 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	ITPR3	Q14573	2671 aa		13.09	□□□□□ -0.31
SNHG17-208	ENST00000456953	PIPSL	A2A3N6	862 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	CDC14C	A4D256	554 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	WIPF3	A6NGB9	483 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	TRAFD1	O14545	582 aa	Predicted RBP	13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	KATNA1	O75449	491 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	PALM	O75781	387 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	SORBS2	O94875	1100 aa	Known RBP	13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	CLDN1	O95832	211 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	ANKRD34C	P0C6C1	535 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	MMP8	P22894	467 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	PBX1	P40424	430 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	HHEX	Q03014	270 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	CNGA3	Q16281	694 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	RAET1G	Q6H3X3	334 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	NOP9	Q86U38	636 aa	Known RBP	13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	TMEM135	Q86UB9	458 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	JOSD2	Q8TAC2	188 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	CPLX3	Q8WVH0	158 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	SH3KBP1	Q96B97	665 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	IQCD	Q96DY2	449 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	STAMBPL1	Q96FJ0	436 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	PHF12	Q96QT6	1004 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	CINP	Q9BW66	212 aa	Predicted RBP	13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	TWSG1	Q9GZX9	223 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	GAN	Q9H2C0	597 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	EPB41L1	Q9H4G0	881 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	STN1	Q9H668	368 aa	Known RBP	13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	SARS2	Q9NP81	518 aa	Known RBP	13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	NLRC4	Q9NPP4	1024 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	PCDHGA6	Q9Y5G7	932 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	FHOD1	Q9Y613	1164 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	PDZD2	O15018	2839 aa		13.08	□□□□□ -0.32
SNHG17-208	ENST00000456953	TRBV23OR9-2	A0A075B6M9	112 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	GOLGA6C	A6NDK9	693 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	GOLGA6B	A6NDN3	693 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	TCP11X1	B4DZS4	312 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	EPHB6	O15197	1021 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	CREB3	O43889	395 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	CREG1	O75629	220 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	DNAJB5	O75953	348 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	HEXIM1	O94992	359 aa	Known RBP	13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	MME	P08473	750 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	GOLGA6D	P0CG33	693 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	ZNF28	P17035	718 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	POU3F2	P20265	443 aa	Predicted RBP	13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	VIPR1	P32241	457 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	ETV3	P41162	512 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	NDST2	P52849	883 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	EPHA4	P54764	986 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	AP1S1	P61966	158 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	SEMA5A	Q13591	1074 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	TRIM14	Q14142	442 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	NADK2	Q4G0N4	442 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	PYCR3	Q53H96	274 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	DOK6	Q6PKX4	331 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	CBARP	Q8N350	705 aa	Predicted RBP	13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	GALNT6	Q8NCL4	622 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	SLC29A3	Q9BZD2	475 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	GOLGA6A	Q9NYA3	693 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	KLHL3	Q9UH77	587 aa		13.07	□□□□□ -0.32
SNHG17-208	ENST00000456953	NF1	P21359	2839 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953		A0A1W2PQ67	120 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	ARHGAP42	A6NI28	874 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	GOLGA6L6	A8MZA4	724 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	PSMD11	O00231	422 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	KRT38	O76015	456 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	EML2	O95834	649 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	NFKBIA	P25963	317 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	VARS	P26640	1264 aa	Known RBP	13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	CASP14	P31944	242 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	HTR7	P34969	479 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	SCNN1B	P51168	640 aa		13.06	□□□□□ -0.32
SNHG17-208	ENST00000456953	AIF1	P55008	147 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms