RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 WDR48Q8TAF3 677 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 IFI44Q8TCB0 444 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 SPATA13Q96N96 652 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 HERPUD2Q9BSE4 406 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 SPATA16Q9BXB7 569 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 PADI4Q9UM07 663 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 CEP295Q9C0D2 2601 aa23.05■■□□□ 1.28
CBX3-204ENST00000456948 EME2A4GXA9 379 aaPredicted RBP23.04■■□□□ 1.28
CBX3-204ENST00000456948 SLC4A1P02730 911 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 PIRTP0C851 137 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 GNPDA1P46926 289 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 DCDC1P59894 354 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 CCZ1BP86790 482 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 CCZ1P86791 482 aaPredicted RBP23.04■■□□□ 1.28
CBX3-204ENST00000456948 SLC1A5Q15758 541 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 SIRPB2Q5JXA9 342 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 HENMT1Q5T8I9 393 aaKnown RBP23.04■■□□□ 1.28
CBX3-204ENST00000456948 DOK6Q6PKX4 331 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 EFL1Q7Z2Z2 1120 aaKnown RBP23.04■■□□□ 1.28
CBX3-204ENST00000456948 MAPK15Q8TD08 544 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 GATA6Q92908 595 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 MRGPRX2Q96LB1 330 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 FAM118BQ9BPY3 351 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 TMEM168Q9H0V1 697 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 CARD9Q9H257 536 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 DPEP2Q9H4A9 486 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 C10orf88Q9H8K7 445 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 SUFUQ9UMX1 484 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 CLCA2Q9UQC9 943 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 EPG5Q9HCE0 2579 aa23.04■■□□□ 1.28
CBX3-204ENST00000456948 CACNA1BQ00975 2339 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 C5orf60A6NFR6 353 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 INPP4BO15327 924 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 STIP1P31948 543 aaKnown RBP23.03■■□□□ 1.28
CBX3-204ENST00000456948 ACTN2P35609 894 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 HMGCLP35914 325 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 KLF1Q13351 362 aaPredicted RBP23.03■■□□□ 1.28
CBX3-204ENST00000456948 ZNF569Q5MCW4 686 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 FAM182AQ5T1J6 154 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 HES3Q5TGS1 186 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 MEI1Q5TIA1 1274 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 GALNT13Q8IUC8 556 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 PDCD7Q8N8D1 485 aaKnown RBP23.03■■□□□ 1.28
CBX3-204ENST00000456948 OXNAD1Q96HP4 312 aaPredicted RBP23.03■■□□□ 1.28
CBX3-204ENST00000456948 SUDS3Q9H7L9 328 aaPredicted RBP23.03■■□□□ 1.28
CBX3-204ENST00000456948 CAAP1Q9H8G2 361 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 RMI1Q9H9A7 625 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 SIRPGQ9P1W8 387 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 VPS18Q9P253 973 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 NFKBIL1Q9UBC1 381 aaPredicted RBP23.03■■□□□ 1.28
CBX3-204ENST00000456948 PPP2R2CQ9Y2T4 447 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 PKP3Q9Y446 797 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 GPSM3Q9Y4H4 160 aa23.03■■□□□ 1.28
CBX3-204ENST00000456948 PTPRBP23467 1997 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 F5H423 210 aaPredicted RBP23.02■■□□□ 1.28
CBX3-204ENST00000456948 ZW10O43264 779 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 OPA1O60313 960 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 PPFIA2O75334 1257 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 SOD1P00441 154 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 BIRC2Q13490 618 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 TCEA2Q15560 299 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 PARP6Q2NL67 630 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 P3H1Q32P28 736 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 SLC35F3Q8IY50 421 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 TRAM1L1Q8N609 369 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 CCDC110Q8TBZ0 833 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 GPBAR1Q8TDU6 330 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 MAIP1Q8WWC4 291 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 COX14Q96I36 57 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 PLEKHG4BQ96PX9 1271 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 AGAP2Q99490 1192 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 FEZ2Q9UHY8 353 aaPredicted RBP23.02■■□□□ 1.28
CBX3-204ENST00000456948 TMEM98Q9Y2Y6 226 aa23.02■■□□□ 1.28
CBX3-204ENST00000456948 PSMD3O43242 534 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 SLC25A14O95258 325 aaPredicted RBP23.01■■□□□ 1.27
CBX3-204ENST00000456948 CELA2BP08218 269 aaPredicted RBP23.01■■□□□ 1.27
CBX3-204ENST00000456948 POLD2P49005 469 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 PDE1BQ01064 536 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 INSM1Q01101 510 aaPredicted RBP23.01■■□□□ 1.27
CBX3-204ENST00000456948 LRP8Q14114 963 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 ALS2CLQ60I27 953 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 GLT6D1Q7Z4J2 308 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 FAM71DQ8N9W8 422 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 BLOC1S5Q8TDH9 187 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 SCARF2Q96GP6 870 aaPredicted RBP23.01■■□□□ 1.27
CBX3-204ENST00000456948 DEPDC7Q96QD5 511 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 OR2M4Q96R27 311 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 FICDQ9BVA6 458 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 TMEM121BQ9BXQ6 578 aaPredicted RBP23.01■■□□□ 1.27
CBX3-204ENST00000456948 ZNHIT2Q9UHR6 403 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 ZMIZ1Q9ULJ6 1067 aa23.01■■□□□ 1.27
CBX3-204ENST00000456948 LY6G6EA0A0G2JKS1 128 aa23■■□□□ 1.27
CBX3-204ENST00000456948 FAM149AA5PLN7 773 aa23■■□□□ 1.27
CBX3-204ENST00000456948 C2orf81A6NN90 581 aa23■■□□□ 1.27
CBX3-204ENST00000456948 GPR89AB7ZAQ6 455 aa23■■□□□ 1.27
CBX3-204ENST00000456948 MT-CO3P00414 261 aa23■■□□□ 1.27
CBX3-204ENST00000456948 GPR89BP0CG08 455 aa23■■□□□ 1.27
CBX3-204ENST00000456948 MYF5P13349 255 aa23■■□□□ 1.27
CBX3-204ENST00000456948 PSMB4P28070 264 aa23■■□□□ 1.27
CBX3-204ENST00000456948 ADCY8P40145 1251 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms