RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ACTR1AP61163 376 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 CTBSQ01459 385 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 CDK18Q07002 472 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 CCDC173Q0VFZ6 552 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 PRKD1Q15139 912 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-203ENST00000454233 FOXR1Q6PIV2 292 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 SLC30A9Q6PML9 568 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 B4GALNT4Q76KP1 1039 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 MARK2Q7KZI7 788 aaKnown RBP10.62□□□□□ -0.71
DDX39A-203ENST00000454233 LYSMD3Q7Z3D4 306 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 PDZD3Q86UT5 571 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 TRIM74Q86UV6 250 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 NRROSQ86YC3 692 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 GALNT13Q8IUC8 556 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 ZNF248Q8NDW4 579 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 SCARF2Q96GP6 870 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-203ENST00000454233 COX14Q96I36 57 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 TEKT5Q96M29 485 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 TMEM74Q96NL1 305 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 SRPK1Q96SB4 655 aaKnown RBP10.62□□□□□ -0.71
DDX39A-203ENST00000454233 AGAP2Q99490 1192 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 ZFYVE1Q9HBF4 777 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 MAGEE1Q9HCI5 957 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 EPB41L5Q9HCM4 733 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 RAD18Q9NS91 495 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 SPATS2LQ9NUQ6 558 aaKnown RBP10.62□□□□□ -0.71
DDX39A-203ENST00000454233 VPS18Q9P253 973 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 SAE1Q9UBE0 346 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-203ENST00000454233 TFR2Q9UP52 801 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 PCDHGA8Q9Y5G5 932 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 RNF215Q9Y6U7 377 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 ZZEF1O43149 2961 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 A0A1W2PQM1 296 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 HACD1B0YJ81 288 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 PMPCBO75439 489 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 NDST3O95803 873 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 MT-CYBP00156 380 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 FGF1P05230 155 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 PECAM1P16284 738 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 FECHP22830 423 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 ITPKBP27987 946 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 CETN2P41208 172 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 MLLT3P42568 568 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 MAZP56270 477 aaKnown RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 COPS2P61201 443 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 EIF3IQ13347 325 aaKnown RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 LRP8Q14114 963 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 PPP2R5EQ16537 467 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 PYCR3Q53H96 274 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 HENMT1Q5T8I9 393 aaKnown RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 CCDC181Q5TID7 509 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 IGF2-ASQ6U949 168 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 SPRED1Q7Z699 444 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 ZC3H18Q86VM9 953 aaKnown RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 SFTPA2Q8IWL1 248 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 ARL14Q8N4G2 192 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 SPATA22Q8NHS9 363 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 PTCD2Q8WV60 388 aaKnown RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 TADA1Q96BN2 335 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 HAUS1Q96CS2 278 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 LIN37Q96GY3 246 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 SLC46A1Q96NT5 459 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 TRIB3Q96RU7 358 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 VAT1Q99536 393 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 FERMT1Q9BQL6 677 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 GPR63Q9BZJ6 419 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 KLHL8Q9P2G9 620 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 FAM153AQ9UHL3 310 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 ZNHIT2Q9UHR6 403 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 SHOC2Q9UQ13 582 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 ZNF711Q9Y462 761 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 FREM2Q5SZK8 3169 aa10.61□□□□□ -0.71
DDX39A-203ENST00000454233 ARHGEF17Q96PE2 2063 aaPredicted RBP10.61□□□□□ -0.71
DDX39A-203ENST00000454233 BTNL10A8MVZ5 291 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 H7C0C1 242 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 APOC4-APOC2K7ER74 178 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 CASC3O15234 703 aaKnown RBP10.6□□□□□ -0.71
DDX39A-203ENST00000454233 TNFSF15O95150 251 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 ECEL1O95672 775 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 APOC2P02655 101 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 SLC4A1P02730 911 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 ATP1A1P05023 1023 aaKnown RBP10.6□□□□□ -0.71
DDX39A-203ENST00000454233 PIRTP0C851 137 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 NFKB1P19838 968 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 CCKBRP32239 447 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 CTNNA1P35221 906 aaKnown RBP10.6□□□□□ -0.71
DDX39A-203ENST00000454233 ATP5OP48047 213 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 MARCKSL1P49006 195 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 PDX1P52945 283 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 MAP9Q49MG5 647 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 ZNF569Q5MCW4 686 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 FAM182AQ5T1J6 154 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 BROXQ5VW32 411 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 ALS2CLQ60I27 953 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 BBS12Q6ZW61 710 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 RAB11FIP2Q7L804 512 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 PID1Q7Z2X4 250 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 TMC3Q7Z5M5 1100 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 B3GNT8Q7Z7M8 397 aa10.6□□□□□ -0.71
DDX39A-203ENST00000454233 KIAA1328Q86T90 577 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms