RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 YWHAHQ04917 246 aaPredicted RBP11.29□□□□□ -0.6
SYVN1-204ENST00000449943 DCTN2Q13561 401 aaKnown RBP11.29□□□□□ -0.6
SYVN1-204ENST00000449943 NFYCQ13952 458 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 SEMA3AQ14563 771 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 RABL3Q5HYI8 236 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 NHSL2Q5HYW2 709 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 GPR141Q7Z602 305 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.62e-13■■■■■ 51.1
SYVN1-204ENST00000449943 SERPINB11Q96P15 392 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 CMTM6Q9NX76 183 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 OAZ3Q9UMX2 235 aa11.29□□□□□ -0.6
SYVN1-204ENST00000449943 CCDC162PA2VCL2 907 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 CHRNA1P02708 482 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ALDH2P05091 517 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 MMP2P08253 660 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 FASP25445 335 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ADARP55265 1226 aaKnown RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 UGT3A2Q3SY77 523 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 EPHX4Q8IUS5 362 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ANKFN1Q8N957 763 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 GAB3Q8WWW8 586 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ROPN1LQ96C74 230 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 C1orf50Q9BV19 199 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ANKRD60Q9BZ19 345 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 EBF1Q9UH73 591 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 POLG2Q9UHN1 485 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 MGEA5O60502 916 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 GRK4P32298 578 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ESRRGP62508 458 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 LPIN1Q14693 890 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 GDF6Q6KF10 455 aaPredicted RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 PPP4R4Q6NUP7 873 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 PGBD5Q8N414 524 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ESAMQ96AP7 390 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 RMDN1Q96DB5 314 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 SEPHS2Q99611 448 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ADI1Q9BV57 179 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ZYG11BQ9C0D3 744 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 TIMMDC1Q9NPL8 285 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 RNF112Q9ULX5 631 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ZNF236Q9UL36 1845 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 H0YJX3 145 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ARPC2O15144 300 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 CLASP2O75122 1294 aaKnown RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 RHOBTB1O94844 696 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 FMO4P31512 558 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 STT3AP46977 705 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ACADVLP49748 655 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 CDK9P50750 372 aaKnown RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 SNRNP27Q8WVK2 155 aaKnown RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ADAM2Q99965 735 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 POLR3BQ9NW08 1133 aaPredicted RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 TTC3P53804 2025 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 MAGEB3O15480 346 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 LDB2O43679 373 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 FOXD2O60548 495 aaPredicted RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 CYBBP04839 570 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 LBPP18428 481 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 PAX3P23760 479 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ACVRL1P37023 503 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 EIF4EBP2Q13542 120 aaPredicted RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 AFMIDQ63HM1 303 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 BORAQ6PGQ7 559 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 CAMK1DQ8IU85 385 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 CMTR2Q8IYT2 770 aaKnown RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 TFAP2CQ92754 450 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 IGSF8Q969P0 613 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 RPRD1AQ96P16 312 aaPredicted RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 TUBB1Q9H4B7 451 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ARNT2Q9HBZ2 717 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 VPS45Q9NRW7 570 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 CCM2LQ9NUG4 571 aaPredicted RBP11.28□□□□□ -0.6
SYVN1-204ENST00000449943 ACTL7AQ9Y615 435 aa11.28□□□□□ -0.6
SYVN1-204ENST00000449943 A0A0J9YVX5 310 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 SOAT2O75908 522 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 BMP2P12643 396 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 MAPK10P53779 464 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 GALNT1Q10472 559 aaPredicted RBP11.27□□□□□ -0.6
SYVN1-204ENST00000449943 MS4A13Q5J8X5 152 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 MRNIPQ6NTE8 343 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 C8orf82Q6P1X6 216 aaPredicted RBP11.27□□□□□ -0.6
SYVN1-204ENST00000449943 HACD2Q6Y1H2 254 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 FBXO32Q969P5 355 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 LRRC58Q96CX6 371 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 HSPBAP1Q96EW2 488 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 B3GALT6Q96L58 329 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 TMEM74Q96NL1 305 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 UHRF1Q96T88 793 aaPredicted RBP11.27□□□□□ -0.6
SYVN1-204ENST00000449943 GID8Q9NWU2 228 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 GMIPQ9P107 970 aa11.27□□□□□ -0.6
SYVN1-204ENST00000449943 SCN4AP35499 1836 aa11.27□□□□□ -0.61
SYVN1-204ENST00000449943 BBIP1A8MTZ0 92 aa11.27□□□□□ -0.61
SYVN1-204ENST00000449943 EI24O14681 340 aa11.27□□□□□ -0.61
SYVN1-204ENST00000449943 CHEK2O96017 543 aa11.27□□□□□ -0.61
SYVN1-204ENST00000449943 ALDH3B2P48448 385 aa11.27□□□□□ -0.61
SYVN1-204ENST00000449943 PLIN5Q00G26 463 aa11.27□□□□□ -0.61
SYVN1-204ENST00000449943 POLD3Q15054 466 aaPredicted RBP11.27□□□□□ -0.61
SYVN1-204ENST00000449943 ZBTB46Q86UZ6 589 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms