RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PIRTP0C851 137 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 MYCLP1P12525 358 aaPredicted RBP14.52□□□□□ -0.09
USP39-206ENST00000448971 GPR1P46091 355 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 BLKP51451 505 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 STC1P52823 247 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 GEMP55040 296 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 WNT3AP56704 352 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 DAB2P98082 770 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 TLE3Q04726 772 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 KLF1Q13351 362 aaPredicted RBP14.52□□□□□ -0.09
USP39-206ENST00000448971 MPP3Q13368 585 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 PRRT3Q5FWE3 981 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 PNCKQ6P2M8 343 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 LYSMD3Q7Z3D4 306 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 HID1Q8IV36 788 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 PELI3Q8N2H9 469 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 SLC25A45Q8N413 288 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 UBE2Q2Q8WVN8 375 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 FUBP1Q96AE4 644 aaKnown RBP14.52□□□□□ -0.09
USP39-206ENST00000448971 TADA1Q96BN2 335 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 OXNAD1Q96HP4 312 aaPredicted RBP14.52□□□□□ -0.09
USP39-206ENST00000448971 LYSMD1Q96S90 227 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 LRRC61Q9BV99 259 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 CARD9Q9H257 536 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 TCEAL2Q9H3H9 227 aaPredicted RBP14.52□□□□□ -0.09
USP39-206ENST00000448971 KLF15Q9UIH9 416 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 MOSPD1Q9UJG1 213 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 SHOC2Q9UQ13 582 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 CLCA2Q9UQC9 943 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 ZNF711Q9Y462 761 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 MAST4O15021 2626 aa14.52□□□□□ -0.09
USP39-206ENST00000448971 TEX51A0A1B0GUA7 166 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 TCRBV7S2A1N4TA0A589 114 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 PDE2AO00408 941 aaPredicted RBP14.51□□□□□ -0.09
USP39-206ENST00000448971 TRIM38O00635 465 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 SCAMP1O15126 338 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 CTSEP14091 401 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 PLA2G2AP14555 144 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 PSMB4P28070 264 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 CDK3Q00526 305 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 PRPSAP1Q14558 356 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 TCEA2Q15560 299 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 ALG11Q2TAA5 492 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 TBC1D25Q3MII6 688 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 ANKRD20A2Q5SQ80 823 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 ANKRD20A1Q5TYW2 823 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 ANKRD20A3Q5VUR7 823 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 KDELC1Q6UW63 502 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 ARHGEF18Q6ZSZ5 1173 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 RFLNAQ6ZTI6 216 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 GPR155Q7Z3F1 870 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 TECPR1Q7Z6L1 1165 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 SLC25A41Q8N5S1 370 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 OR56A4Q8NGH8 313 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 OR4C6Q8NH72 309 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 CCDC110Q8TBZ0 833 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 ATG4AQ8WYN0 398 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 SCAMP4Q969E2 229 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 TSACCQ96A04 125 aaPredicted RBP14.51□□□□□ -0.09
USP39-206ENST00000448971 SPATA13Q96N96 652 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 GPR63Q9BZJ6 419 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 ABCG8Q9H221 673 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 KCNF1Q9H3M0 494 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 SUDS3Q9H7L9 328 aaPredicted RBP14.51□□□□□ -0.09
USP39-206ENST00000448971 ZFYVE1Q9HBF4 777 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 NLGN3Q9NZ94 848 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 DOLKQ9UPQ8 538 aa14.51□□□□□ -0.09
USP39-206ENST00000448971 R3HDM2Q9Y2K5 976 aaKnown RBP14.51□□□□□ -0.09
USP39-206ENST00000448971 NAV2Q8IVL1 2488 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 TMEM202A6NGA9 273 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 ZSCAN12O43309 604 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 SIGLEC6O43699 453 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 ANXA9O76027 345 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 PYGLP06737 847 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 HLA-DPA1P20036 260 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 ACTN2P35609 894 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 CHRNA4P43681 627 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 HK3P52790 923 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 SRP54P61011 504 aaKnown RBP14.5□□□□□ -0.09
USP39-206ENST00000448971 E2F1Q01094 437 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 PTSQ03393 145 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 C1orf61Q13536 156 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 DEFB133Q30KQ1 61 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 ALS2CLQ60I27 953 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 DOK6Q6PKX4 331 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 ZNF765Q7L2R6 523 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 ZNF605Q86T29 641 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 SLC13A5Q86YT5 568 aaPredicted RBP14.5□□□□□ -0.09
USP39-206ENST00000448971 SPACA3Q8IXA5 215 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 FAM71DQ8N9W8 422 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 LRRC45Q96CN5 670 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 MRGPRX2Q96LB1 330 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 FICDQ9BVA6 458 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 DUSP23Q9BVJ7 150 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 RIOK2Q9BVS4 552 aaKnown RBP14.5□□□□□ -0.09
USP39-206ENST00000448971 LGR4Q9BXB1 951 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 FGF22Q9HCT0 170 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 PNMA8BQ9ULN7 279 aaPredicted RBP14.5□□□□□ -0.09
USP39-206ENST00000448971 PIEZO2Q9H5I5 2752 aa14.5□□□□□ -0.09
USP39-206ENST00000448971 PRSS38A1L453 326 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms