RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 KIF20BQ96Q89 1820 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 ELOVL7A1L3X0 281 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PRMT5O14744 637 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 MDM4O15151 490 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 HNF4AP41235 474 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 RFTN2Q52LD8 501 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 LDLRAP1Q5SW96 308 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 ZYG11AQ6WRX3 759 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 FAM92BQ6ZTR7 304 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PLPPR4Q7Z2D5 763 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 GALNT5Q7Z7M9 940 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 P2RY8Q86VZ1 359 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PNPT1Q8TCS8 783 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PTCD2Q8WV60 388 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 NXNL1Q96CM4 212 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 NODALQ96S42 347 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 CPXM1Q96SM3 734 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PDGFDQ9GZP0 370 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 RSPH9Q9H1X1 276 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 C12orf65Q9H3J6 166 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 FAM149AA5PLN7 773 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 STX16-NPEPL1H3BU86 382 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 STX16O14662 325 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 SLC28A2O43868 658 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PKMP14618 531 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 GBE1Q04446 702 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 FUT2Q10981 343 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 VPS26BQ4G0F5 336 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 TNFAIP8L3Q5GJ75 292 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 CCNYL2Q5T2Q4 361 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 VWA5B1Q5TIE3 1220 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 LCLAT1Q6UWP7 414 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 RALGPS2Q86X27 583 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 RIOX2Q8IUF8 465 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 NETO2Q8NC67 525 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 TWIST2Q8WVJ9 160 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 CITED4Q96RK1 184 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 BCL2L14Q9BZR8 327 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 LMAN2LQ9H0V9 348 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 TRIT1Q9H3H1 467 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 BRD9Q9H8M2 597 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 SP140LQ9H930 580 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 LRTM1Q9HBL6 345 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 INTS7Q9NVH2 962 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 GIN1Q9NXP7 522 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 SALL4Q9UJQ4 1053 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 STOML2Q9UJZ1 356 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PCDHB9Q9Y5E1 797 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 XYLBO75191 536 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PGK1P00558 417 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TRBC1P01850 177 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 SDC2P34741 201 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 GRM5P41594 1212 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 GPR1P46091 355 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 POU5F1Q01860 360 aaKnown RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 SCN1BQ07699 218 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 ABRQ12979 859 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TCEA2Q15560 299 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PIK3R6Q5UE93 754 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 OLFML2AQ68BL7 652 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 ZZZ3Q8IYH5 903 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 SLC4A11Q8NBS3 891 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 OR4A15Q8NGL6 344 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 IL31RAQ8NI17 732 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 C11orf24Q96F05 449 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 DIRAS2Q96HU8 199 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 APOLD1Q96LR9 279 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TMEM165Q9HC07 324 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 NKIRAS2Q9NYR9 191 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TAS2R1Q9NYW7 299 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 OR10H1Q9Y4A9 318 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 C5orf60A6NFR6 353 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TEX28O15482 410 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TULP3O75386 442 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 UGT2B17O75795 530 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 IFNGP01579 166 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 RPL9P32969 192 aaKnown RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 UGT1A5P35504 534 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 ATN1P54259 1190 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 RAB15P59190 212 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CBX3Q13185 183 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CCDC157Q569K6 752 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 PPM1JQ5JR12 505 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 MON1BQ7L1V2 547 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 SLC26A9Q7LBE3 791 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CACUL1Q86Y37 369 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 GALNT15Q8N3T1 639 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 TOP6BLQ8N6T0 577 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CXorf40AQ8TE69 158 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 MRIQ9BWK5 157 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 GATA5Q9BWX5 397 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 ALG2Q9H553 416 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 FAM198AQ9UFP1 575 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 POMPQ9Y244 141 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 NCKAP1Q9Y2A7 1128 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 URADA6NGE7 173 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 SLC9A3R1O14745 358 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 RPP40O75818 363 aaKnown RBP7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CSH1P0DML2 217 aa7.75□□□□□ -1.17
NEDD9-204ENST00000448183 CSH2P0DML3 217 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms