RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 TRMT5Q32P41 509 aaKnown RBP19.43■□□□□ 0.7
FAM3A-215ENST00000447601 LYSMD3Q7Z3D4 306 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 PAF1Q8N7H5 531 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 PTGR2Q8N8N7 351 aaPredicted RBP19.43■□□□□ 0.7
FAM3A-215ENST00000447601 OR6K2Q8NGY2 324 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 CEP70Q8NHQ1 597 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 SHKBP1Q8TBC3 707 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 STMN2Q93045 179 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 EXT2Q93063 718 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 ATOH8Q96SQ7 321 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 GPR21Q99679 349 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 RTKNQ9BST9 563 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 SMG9Q9H0W8 520 aaKnown RBP19.43■□□□□ 0.7
FAM3A-215ENST00000447601 ZNF385DQ9H6B1 395 aa19.43■□□□□ 0.7
FAM3A-215ENST00000447601 CXXC1Q9P0U4 656 aaPredicted RBP19.43■□□□□ 0.7
FAM3A-215ENST00000447601 NKX1-2Q9UD57 310 aaPredicted RBP19.43■□□□□ 0.7
FAM3A-215ENST00000447601 FNDC3AQ9Y2H6 1198 aaKnown RBP19.43■□□□□ 0.7
FAM3A-215ENST00000447601 LOC100653049A0A140TA62 436 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 CCDC189A1A4V9 331 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 SDHDO14521 159 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 KRT34O76011 436 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 ANP32DO95626 131 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 ESR1P03372 595 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 PIK3R1P27986 724 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 CCR2P41597 374 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 EPHA5P54756 1037 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 SLC25A3Q00325 362 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 KHDC1Q4VXA5 237 aaKnown RBP19.42■□□□□ 0.7
FAM3A-215ENST00000447601 SETMARQ53H47 684 aaPredicted RBP19.42■□□□□ 0.7
FAM3A-215ENST00000447601 ARHGAP15Q53QZ3 475 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 CERS6Q6ZMG9 384 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 TAS2R42Q7RTR8 314 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 CMTM8Q8IZV2 173 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 WDR60Q8WVS4 1066 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 KCNJ9Q92806 393 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 HCFC1R1Q9NWW0 138 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 TRMT6Q9UJA5 497 aaKnown RBP19.42■□□□□ 0.7
FAM3A-215ENST00000447601 INTS6Q9UL03 887 aaKnown RBP19.42■□□□□ 0.7
FAM3A-215ENST00000447601 OBSL1O75147 1896 aa19.42■□□□□ 0.7
FAM3A-215ENST00000447601 SYCE1LA8MT33 242 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 ALPIP09923 528 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 SERPINA4P29622 427 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 BTKQ06187 659 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 CUL3Q13618 768 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 UNC50Q53HI1 259 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 ACSBG2Q5FVE4 666 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 PITRM1Q5JRX3 1037 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 PSRC1Q6PGN9 363 aaPredicted RBP19.41■□□□□ 0.7
FAM3A-215ENST00000447601 OR2AP1Q8NGE2 309 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 RP9Q8TA86 221 aaKnown RBP19.41■□□□□ 0.7
FAM3A-215ENST00000447601 ACTRT2Q8TDY3 377 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 BADQ92934 168 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 LENG8Q96PV6 779 aaPredicted RBP19.41■□□□□ 0.7
FAM3A-215ENST00000447601 MEAF6Q9HAF1 191 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 ZFYVE1Q9HBF4 777 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 RNF112Q9ULX5 631 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 A0A0J9YYE9 177 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 RGSL1A5PLK6 1076 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 GOLGA8CPA6NN73 597 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 UBXN8O00124 270 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 TLL1O43897 1013 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 OR1I1O60431 355 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 CSPG5O95196 566 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 TRBC1P01850 177 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 GFAPP14136 432 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 PTPN2P17706 415 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 INHBCP55103 352 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 HERC3Q15034 1050 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 CTSL3PQ5NE16 218 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 UGT3A1Q6NUS8 523 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 RPS27LQ71UM5 84 aaKnown RBP19.41■□□□□ 0.7
FAM3A-215ENST00000447601 LMLNQ96KR4 655 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 CATSPER2Q96P56 530 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 SLC7A8Q9UHI5 535 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 FIS1Q9Y3D6 152 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 TRAF6Q9Y4K3 522 aa19.41■□□□□ 0.7
FAM3A-215ENST00000447601 A0A088AWK7 358 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 H0Y3Z8 333 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 SKAP2O75563 359 aaPredicted RBP19.4■□□□□ 0.7
FAM3A-215ENST00000447601 PRAMEF12O95522 483 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 MTHFD2P13995 350 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 SNRPD1P62314 119 aaKnown RBP19.4■□□□□ 0.7
FAM3A-215ENST00000447601 PFKFB4Q16877 469 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 TMEM240Q5SV17 173 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 POF1BQ8WVV4 589 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 ISG20Q96AZ6 181 aaKnown RBP19.4■□□□□ 0.7
FAM3A-215ENST00000447601 EID2BQ96D98 161 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 CLPTM1LQ96KA5 538 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 TTC1Q99614 292 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 TNKS2Q9H2K2 1166 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 TLR9Q9NR96 1032 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 CCL26Q9Y258 94 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 PCDHB1Q9Y5F3 818 aa19.4■□□□□ 0.7
FAM3A-215ENST00000447601 A0A0U1RQS6 177 aa19.39■□□□□ 0.7
FAM3A-215ENST00000447601 C1orf232A0A0U1RR37 186 aa19.39■□□□□ 0.7
FAM3A-215ENST00000447601 CAPN8A6NHC0 703 aa19.39■□□□□ 0.7
FAM3A-215ENST00000447601 SUPT3HB4E1H0 165 aa19.39■□□□□ 0.7
FAM3A-215ENST00000447601 E5RI56 91 aa19.39■□□□□ 0.7
FAM3A-215ENST00000447601 UBFD1O14562 309 aaKnown RBP19.39■□□□□ 0.7
FAM3A-215ENST00000447601 NIPSNAP2O75323 286 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms