RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 IP6K1Q92551 441 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 ZKSCAN4Q969J2 545 aaPredicted RBP4.26□□□□□ -1.73
VPS29-202ENST00000447578 SLC22A18Q96BI1 424 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 MMABQ96EY8 250 aaPredicted RBP4.26□□□□□ -1.73
VPS29-202ENST00000447578 VMP1Q96GC9 406 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 PGAM5Q96HS1 289 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 C1orf74Q96LT6 269 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 CTAGE1Q96RT6 745 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 ADPGKQ9BRR6 497 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 IFT27Q9BW83 186 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 GLIS2Q9BZE0 524 aaPredicted RBP4.26□□□□□ -1.73
VPS29-202ENST00000447578 ATP8A2Q9NTI2 1148 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 TAB2Q9NYJ8 693 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 CPSF2Q9P2I0 782 aaKnown RBP4.26□□□□□ -1.73
VPS29-202ENST00000447578 NENFQ9UMX5 172 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 ICKQ9UPZ9 632 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.26□□□□□ -1.73
VPS29-202ENST00000447578 CLDN16Q9Y5I7 305 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 XRN1Q8IZH2 1706 aaKnown RBP4.26□□□□□ -1.73
VPS29-202ENST00000447578 PIK3C2AO00443 1686 aa4.26□□□□□ -1.73
VPS29-202ENST00000447578 EMSYQ7Z589 1322 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 A0A1W2PRG0 241 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 KCNJ18B7U540 433 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 USP17L23D6RBM5 183 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 HEXAP06865 529 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 KRT10P13645 584 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 AKR1A1P14550 325 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 PTMSP20962 102 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 OAS2P29728 719 aaKnown RBP4.25□□□□□ -1.73
VPS29-202ENST00000447578 CTNNA1P35221 906 aaKnown RBP4.25□□□□□ -1.73
VPS29-202ENST00000447578 IDUAP35475 653 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 GABRB2P47870 512 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 PIP4K2AP48426 406 aaPredicted RBP4.25□□□□□ -1.73
VPS29-202ENST00000447578 NRIP1P48552 1158 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 CYP2J2P51589 502 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 EFNA5P52803 228 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 ARSFP54793 590 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 RHAGQ02094 409 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 RUNX2Q13950 521 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 KPNB1Q14974 876 aaKnown RBP4.25□□□□□ -1.73
VPS29-202ENST00000447578 RPE65Q16518 533 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 C5orf22Q49AR2 442 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 ZNF585BQ52M93 769 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 FAM171A1Q5VUB5 890 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 HMBOX1Q6NT76 420 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 ZNF793Q6ZN11 406 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 DNAAF5Q86Y56 855 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 UEVLDQ8IX04 471 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 TMEM217Q8N7C4 229 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 SYT2Q8N9I0 419 aaPredicted RBP4.25□□□□□ -1.73
VPS29-202ENST00000447578 KCNH5Q8NCM2 988 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 GCNAQ96QF7 691 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 TM2D2Q9BX73 214 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 KLHL4Q9C0H6 718 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 ZWILCHQ9H900 591 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 KIF9Q9HAQ2 790 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 GRPEL1Q9HAV7 217 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 MLXIPLQ9NP71 852 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 ASAH2Q9NR71 780 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 CTNNAL1Q9UBT7 734 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 FBXL17Q9UF56 701 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 MAFFQ9ULX9 164 aa4.25□□□□□ -1.73
VPS29-202ENST00000447578 RIMS1Q86UR5 1692 aaKnown RBP4.25□□□□□ -1.73
VPS29-202ENST00000447578 SOS1Q07889 1333 aaPredicted RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 NWD1Q149M9 1564 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 NCOA3Q9Y6Q9 1424 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 IGLV5-39A0A0G2JS06 123 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 A8MZ25 164 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 RRHO14718 337 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 CLGNO14967 610 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 TBX10O75333 385 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 CSPG5O95196 566 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 AFPP02771 609 aaKnown RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 SCG2P13521 617 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 GABRB1P18505 474 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 EIF2S2P20042 333 aaKnown RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 TBXAS1P24557 533 aaPredicted RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 TACR3P29371 465 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 CAPZA2P47755 286 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 MFAP4P55083 255 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 KRT83P78385 493 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 HSF1Q00613 529 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 OLIG2Q13516 323 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 PCLAFQ15004 111 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 RNPS1Q15287 305 aaKnown RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 KYNUQ16719 465 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 PLK5Q496M5 336 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 PLEKHO1Q53GL0 409 aaPredicted RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 EARS2Q5JPH6 523 aaKnown RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 VWA5B1Q5TIE3 1220 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 TXNDC8Q6A555 127 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 KIAA0930Q6ICG6 404 aaPredicted RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 ZNF474Q6S9Z5 364 aaPredicted RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 GLDNQ6ZMI3 551 aaPredicted RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 UBE2Q1Q7Z7E8 422 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 RFX6Q8HWS3 928 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 LINC00346Q8IVM7 164 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 KIAA2013Q8IYS2 634 aa4.24□□□□□ -1.73
VPS29-202ENST00000447578 PAQR4Q8N4S7 273 aaPredicted RBP4.24□□□□□ -1.73
VPS29-202ENST00000447578 POGLUT1Q8NBL1 392 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms