RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 MAZP56270 477 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 YWHAGP61981 247 aaKnown RBP eCLIP3.27□□□□□ -1.89
PMS1-215ENST00000447232 ADORA2A-AS1P86434 159 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 SGCGQ13326 291 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 SLC12A1Q13621 1099 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 DLG2Q15700 870 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 CEBPEQ15744 281 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 ASIC2Q16515 512 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 KRT79Q5XKE5 535 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 CPLX2Q6PUV4 134 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 BLOC1S2Q6QNY1 142 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 SYVN1Q86TM6 617 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 WDR49Q8IV35 697 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 FAM186BQ8IYM0 893 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 ARHGAP18Q8N392 663 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 C12orf29Q8N999 325 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 WFDC11Q8NEX6 87 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 OR2A12Q8NGT7 310 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 GRHL3Q8TE85 626 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 CT55Q8WUE5 264 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 ALG14Q96F25 216 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 SDCBP2Q9H190 292 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 BRMS1Q9HCU9 246 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 OLA1Q9NTK5 396 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 FAM49BQ9NUQ9 324 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 REV1Q9UBZ9 1251 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 SFMBT1Q9UHJ3 866 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 G3BP2Q9UN86 482 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 ZNF281Q9Y2X9 895 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 POLR3KQ9Y2Y1 108 aaPredicted RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 CHD5Q8TDI0 1954 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 SONP18583 2426 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 NBEAL2Q6ZNJ1 2754 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 ANK3Q12955 4377 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 A0A1W2PQJ5 194 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 SHISA3A0PJX4 238 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 GOLGA8IPA6NC78 632 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 GOLGA8JA6NMD2 632 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 ZW10O43264 779 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 MSI1O43347 362 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 ACSL4O60488 711 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 DNAJA2O60884 412 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 CLDN14O95500 239 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 ADORA2BP29275 332 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 VAMP7P51809 220 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 SRP54P61011 504 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 OTUD4Q01804 1114 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 RUNX1T1Q06455 604 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 ZNF174Q15697 407 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 MS4A13Q5J8X5 152 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 RAB41Q5JT25 222 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 ZNF720Q7Z2F6 126 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 DIS3L2Q8IYB7 885 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 SH2D3CQ8N5H7 860 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 TP53I13Q8NBR0 393 aaPredicted RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 KREMEN1Q96MU8 473 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 JAKMIP1Q96N16 626 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 RUFY1Q96T51 708 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 GPR87Q9BY21 358 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 BRD8Q9H0E9 1235 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 LHX9Q9NQ69 397 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 DYRK4Q9NR20 520 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 MBNL1Q9NR56 388 aaKnown RBP3.27□□□□□ -1.89
PMS1-215ENST00000447232 HMGXB4Q9UGU5 601 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 ST6GALNAC2Q9UJ37 374 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 CNTRLQ7Z7A1 2325 aa3.27□□□□□ -1.89
PMS1-215ENST00000447232 TYW5A2RUC4 315 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 TMEM110-MUSTN1A8MSY1 372 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 RHPN2P1A8MT19 583 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 INAFM1C9JVW0 142 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 F5H423 210 aaPredicted RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 CCL21O00585 134 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 PCDH17O14917 1159 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 ZNF185O15231 689 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 TSPAN6O43657 245 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 CDKL5O76039 1030 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 TMEM63AO94886 807 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 HTR3BO95264 441 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 FDPSP14324 419 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 PTPN4P29074 926 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 DDIT3P35638 169 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 CA7P43166 264 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 TSFMP43897 325 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 SLC11A2P49281 568 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 TDGF1P3P51864 188 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 MYL6P60660 151 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 RPS18P62269 152 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 TAGLNQ01995 201 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 NFATC4Q14934 902 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 PCOLCEQ15113 449 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 LLGL1Q15334 1064 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 IL17AQ16552 155 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 ACCSLQ4AC99 568 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 LYPLAL1Q5VWZ2 237 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 ZNF324BQ6AW86 544 aaPredicted RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 PM20D1Q6GTS8 502 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 FOXR2Q6PJQ5 311 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 MEX3BQ6ZN04 569 aaKnown RBP3.26□□□□□ -1.89
PMS1-215ENST00000447232 TAF8Q7Z7C8 310 aa3.26□□□□□ -1.89
PMS1-215ENST00000447232 LILRA2Q8N149 483 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms