RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SEMA3DO95025 777 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 IL6P05231 212 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 OXTRP30559 389 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 FAAP100Q0VG06 881 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 EEF1DP3Q658K8 133 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 NRSN1Q8IZ57 195 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 RTL3Q8N8U3 475 aaKnown RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 CDCA3Q99618 268 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 SDHAF3Q9NRP4 125 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 TCHHQ07283 1943 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 XKRYO14609 159 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 UGT2B4P06133 528 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 FAM58BPP0C7Q3 252 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ADH5P11766 374 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SUOXP51687 545 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 TAS2R41P59536 307 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 BMPR2Q13873 1038 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SLC1A5Q15758 541 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ABHD13Q7L211 337 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CACUL1Q86Y37 369 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CCDC33Q8N5R6 958 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 NAT16Q8N8M0 369 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 OR5B17Q8NGF7 314 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 BCO2Q9BYV7 579 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ACSS3Q9H6R3 686 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CKLFQ9UBR5 152 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 FAM25AB3EWG3 89 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 FAM25CB3EWG5 89 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 FAM25GB3EWG6 89 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 TMEM150CB9EJG8 249 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 PEX12O00623 359 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ITGA2BP08514 1039 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CBSLP0DN79 551 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CBSP35520 551 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ARRB1P49407 418 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 DLG4P78352 724 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 OLR1P78380 273 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 OVGP1Q12889 678 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 MTM1Q13496 603 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 NOMO1Q15155 1222 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 TMEM154Q6P9G4 183 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CACTIN-AS1Q8N1I8 211 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 NACC2Q96BF6 587 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 P2RY11Q96G91 374 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 MAGEL2Q9UJ55 1249 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 PCDHGA2Q9Y5H1 932 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 DUSP10Q9Y6W6 482 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SETD1AO15047 1707 aaKnown RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 STK16O75716 305 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 NME5P56597 212 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 GJA9P57773 515 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 RPL26P61254 145 aaKnown RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF527Q8NB42 609 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CEP41Q9BYV8 373 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ZCWPW1Q9H0M4 648 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SEMA4AQ9H3S1 761 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 FZD8Q9H461 694 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SEMA4BQ9NPR2 832 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 IL36AQ9UHA7 158 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 NUDT5Q9UKK9 219 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 COL2A1P02458 1487 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SHPRHQ149N8 1683 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 NT5C1B-RDH14C9J2C7 533 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ADSLP30566 484 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 GYS2P54840 703 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ECT2LQ008S8 904 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 TLE2Q04725 743 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 DPY19L1Q2PZI1 675 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CNSTQ6PJW8 725 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 RASGEF1AQ8N9B8 481 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 RBM18Q96H35 190 aaKnown RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 PANX1Q96RD7 426 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 C17orf62Q9BQA9 187 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 TMEM79Q9BSE2 394 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 TRIM8Q9BZR9 551 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SPRTNQ9H040 489 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 IL25Q9H293 177 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 IL1RAPQ9NPH3 570 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 FBXO6Q9NRD1 293 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 PCDHGA11Q9Y5H2 935 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ILVBLA1L0T0 632 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 FSCN2O14926 492 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 PRKAG1P54619 331 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 GSTM4Q03013 218 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 MSANTD2Q6P1R3 559 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 KCNK18Q7Z418 384 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 AMZ2Q86W34 360 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 UBR7Q8N806 425 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 DBF4BQ8NFT6 615 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 PXYLP1Q8TE99 480 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 MIPEPQ99797 713 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CDADC1Q9BWV3 514 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 FBXW11Q9UKB1 542 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CPQQ9Y646 472 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 MYH7P12883 1935 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 A0A087WXM4 84 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 IGKV6D-41A0A0C4DH26 115 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 B3GALT2O43825 422 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SLC28A2O43868 658 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms