RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 FOXJ1Q92949 421 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 LENG8Q96PV6 779 aaPredicted RBP17.32■□□□□ 0.36
SGCE-206ENST00000445866 AGAP2Q99490 1192 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 MYOCQ99972 504 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 TXLNGYQ9BZA5 131 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 ASB8Q9H765 288 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 EBF2Q9HAK2 575 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 FZD3Q9NPG1 666 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 C10orf142B7Z368 130 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 H7C0S8 307 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 PRAMEF1O95521 474 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 PCCBP05166 539 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 TSHRP16473 764 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 ARNTP27540 789 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 CNR2P34972 360 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 NUDT1P36639 197 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 GPR1P46091 355 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 DCDC1P59894 354 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 INPP5AQ14642 412 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 HSP90AA5PQ58FG0 334 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 HENMT1Q5T8I9 393 aaKnown RBP17.32■□□□□ 0.36
SGCE-206ENST00000445866 RAET1GQ6H3X3 334 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 PNCKQ6P2M8 343 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 TRMT10BQ6PF06 316 aaKnown RBP17.32■□□□□ 0.36
SGCE-206ENST00000445866 AFTPHQ6ULP2 937 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 PLA2G15Q8NCC3 412 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 KLF6Q99612 283 aaPredicted RBP17.32■□□□□ 0.36
SGCE-206ENST00000445866 ZSCAN5AQ9BUG6 496 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 DUSP15Q9H1R2 295 aaPredicted RBP17.32■□□□□ 0.36
SGCE-206ENST00000445866 MOCS1Q9NZB8 636 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 DMTF1Q9Y222 760 aa17.32■□□□□ 0.36
SGCE-206ENST00000445866 MEI4A8MW99 385 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 K7ESM1 405 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 GAPDHSO14556 408 aaPredicted RBP17.31■□□□□ 0.36
SGCE-206ENST00000445866 CD3EAPO15446 510 aaKnown RBP17.31■□□□□ 0.36
SGCE-206ENST00000445866 SPAG6O75602 509 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 ITGALP20701 1170 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 HNRNPA2B1P22626 353 aaKnown RBP17.31■□□□□ 0.36
SGCE-206ENST00000445866 PHBP35232 272 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 CACNG1Q06432 222 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 ATP13A5Q4VNC0 1218 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 FASTKD1Q53R41 847 aaKnown RBP17.31■□□□□ 0.36
SGCE-206ENST00000445866 PDPK2PQ6A1A2 396 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 CYS1Q717R9 158 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 SDCCAG8Q86SQ7 713 aaPredicted RBP17.31■□□□□ 0.36
SGCE-206ENST00000445866 TRAM1L1Q8N609 369 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 OTUD6BQ8N6M0 293 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 TP53I13Q8NBR0 393 aaPredicted RBP17.31■□□□□ 0.36
SGCE-206ENST00000445866 UHMK1Q8TAS1 419 aaKnown RBP17.31■□□□□ 0.36
SGCE-206ENST00000445866 FBF1Q8TES7 1133 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 UBLCP1Q8WVY7 318 aaPredicted RBP17.31■□□□□ 0.36
SGCE-206ENST00000445866 CAVIN3Q969G5 261 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 SERAC1Q96JX3 654 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 HSPA12BQ96MM6 686 aa17.31■□□□□ 0.36
SGCE-206ENST00000445866 A0A1W2PPC4 97 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 TCRBV9S1A1TA0A576 114 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 CCDC151A5D8V7 595 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 PRAMEF26H0Y7S4 382 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 FPGTO14772 594 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 PRSS56P0CW18 603 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 CD27P26842 260 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 MAOBP27338 520 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 CDKN1CP49918 316 aaPredicted RBP17.3■□□□□ 0.36
SGCE-206ENST00000445866 CLDN2P57739 230 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 NFATC2Q13469 925 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 ITGA9Q13797 1035 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 FRG1Q14331 258 aaKnown RBP17.3■□□□□ 0.36
SGCE-206ENST00000445866 STAT4Q14765 748 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 IRF4Q15306 451 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 GPR33Q49SQ1 333 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 UBAP2Q5T6F2 1119 aaKnown RBP17.3■□□□□ 0.36
SGCE-206ENST00000445866 ARMCX6Q7L4S7 300 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 SNX20Q7Z614 316 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 KCNMB4Q86W47 210 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 SLC41A1Q8IVJ1 513 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 RGL4Q8IZJ4 473 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 PELI3Q8N2H9 469 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 ZBTB44Q8NCP5 570 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 DTX3LQ8TDB6 740 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 CERS2Q96G23 380 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 SGSM3Q96HU1 749 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 MIR1-1HGQ9H1L0 117 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 IARS2Q9NSE4 1012 aaKnown RBP17.3■□□□□ 0.36
SGCE-206ENST00000445866 CATSPERZQ9NTU4 200 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 NFKBIL1Q9UBC1 381 aaPredicted RBP17.3■□□□□ 0.36
SGCE-206ENST00000445866 EIF2B4Q9UI10 523 aaKnown RBP17.3■□□□□ 0.36
SGCE-206ENST00000445866 PCDHGA2Q9Y5H1 932 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 HS3ST3A1Q9Y663 406 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 CKAP5Q14008 2032 aa17.3■□□□□ 0.36
SGCE-206ENST00000445866 UQCRHLA0A096LP55 91 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 DLL1O00548 723 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 RIPK2O43353 540 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 UQCRHP07919 91 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 PMLP29590 882 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 PTGER3P43115 390 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 MGAT5Q09328 741 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 SLC29A2Q14542 456 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 SPDYCQ5MJ68 293 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 WDR45BQ5MNZ6 344 aa17.29■□□□□ 0.36
SGCE-206ENST00000445866 MRNIPQ6NTE8 343 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms