RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 CLASP2O75122 1294 aaKnown RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 SRP72O76094 671 aaKnown RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 HMGA1P17096 107 aaKnown RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 STX1BP61266 288 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 ATP6V0D1P61421 351 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 PDK3Q15120 406 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 DEFB115Q30KQ5 88 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 CCDC68Q9H2F9 335 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 TMEM181Q9P2C4 612 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 CD300AQ9UGN4 299 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 TBC1D30Q9Y2I9 924 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 PTGDR2Q9Y5Y4 395 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 OAS3Q9Y6K5 1087 aaKnown RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 PRORSD1PA6NEY8 169 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 SUPT3HB4E1H0 165 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 DENRO43583 198 aaKnown RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 SUPT3HO75486 399 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 NDUFS3O75489 264 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 CES1P23141 567 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 OR1D2P34982 312 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 CCNHP51946 323 aaPredicted RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 RAD51Q06609 339 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 TRAP1Q12931 704 aaKnown RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 ZNF177Q13360 481 aaPredicted RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 UGT2A3Q6UWM9 527 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 LRRC43Q8N309 656 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 FBXO39Q8N4B4 442 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 MARVELD2Q8N4S9 558 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 TMEM102Q8N9M5 508 aaPredicted RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 LPCAT1Q8NF37 534 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 BIRC8Q96P09 236 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 PCDHAC1Q9H158 963 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 TUBB1Q9H4B7 451 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 HMX1Q9NP08 348 aaPredicted RBP17.75■□□□□ 0.43
CLDN9-201ENST00000445369 HACD3Q9P035 362 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 CROTQ9UKG9 612 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 RNF112Q9ULX5 631 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 RAI2Q9Y5P3 530 aa17.75■□□□□ 0.43
CLDN9-201ENST00000445369 BBIP1A8MTZ0 92 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 CBX4O00257 560 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 TXNDC9O14530 226 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 ECI2O75521 394 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 RPS17P08708 135 aaKnown RBP17.74■□□□□ 0.43
CLDN9-201ENST00000445369 LPOP22079 712 aaPredicted RBP17.74■□□□□ 0.43
CLDN9-201ENST00000445369 EEF1DP29692 281 aaKnown RBP17.74■□□□□ 0.43
CLDN9-201ENST00000445369 CDKN1CP49918 316 aaPredicted RBP17.74■□□□□ 0.43
CLDN9-201ENST00000445369 ARF5P84085 180 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 CLCQ05315 142 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 RALGDSQ12967 914 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 TLR1Q15399 786 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 CXorf57Q6NSI4 855 aaKnown RBP17.74■□□□□ 0.43
CLDN9-201ENST00000445369 ST13P4Q8IZP2 240 aaPredicted RBP17.74■□□□□ 0.43
CLDN9-201ENST00000445369 TRPC4APQ8TEL6 797 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 GBP5Q96PP8 586 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 KCNA7Q96RP8 456 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 GPR21Q99679 349 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 GKN1Q9NS71 199 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 BACE2Q9Y5Z0 518 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 PLXNA4Q9HCM2 1894 aa17.74■□□□□ 0.43
CLDN9-201ENST00000445369 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 DNAJA2O60884 412 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 RNASEH2AO75792 299 aaKnown RBP17.73■□□□□ 0.43
CLDN9-201ENST00000445369 SEC24AO95486 1093 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 PEX19P40855 299 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 LCP2Q13094 533 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 TSNQ15631 228 aaKnown RBP17.73■□□□□ 0.43
CLDN9-201ENST00000445369 GEN1Q17RS7 908 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 USP41Q3LFD5 358 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 ADGRF1Q5T601 910 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 PSAPL1Q6NUJ1 521 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 REM2Q8IYK8 340 aaPredicted RBP17.73■□□□□ 0.43
CLDN9-201ENST00000445369 PIP4K2CQ8TBX8 421 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 FUBP1Q96AE4 644 aaKnown RBP17.73■□□□□ 0.43
CLDN9-201ENST00000445369 ROPN1LQ96C74 230 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 VN1R3Q9BXE9 311 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 GIMAP2Q9UG22 337 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 RAB26Q9ULW5 256 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 PCDHGC4Q9Y5F7 938 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 A0A0J9YYE9 177 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 A0A1B0GTL3 188 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 AP1G1O43747 822 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 KLK8O60259 260 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 CD160O95971 181 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 CHN2P52757 468 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 GRB7Q14451 532 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 PTPRNQ16849 979 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 KIF19Q2TAC6 998 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 SAMD4BQ5PRF9 694 aaKnown RBP17.73■□□□□ 0.43
CLDN9-201ENST00000445369 C6orf10Q5SRN2 563 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 IL23RQ5VWK5 629 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 RETREG3Q86VR2 466 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 PIANPQ8IYJ0 282 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 RNF168Q8IYW5 571 aaPredicted RBP17.73■□□□□ 0.43
CLDN9-201ENST00000445369 WBP2Q969T9 261 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 ATP6V1E2Q96A05 226 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 TSC22D3Q99576 134 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 C1QTNF3Q9BXJ4 246 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 GALPQ9UBC7 116 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 FKBPLQ9UIM3 349 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms