RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 HACD3Q9P035 362 aa23.84■■□□□ 1.41
C9orf3-207ENST00000445181 COL5A1P20908 1838 aaPredicted RBP23.84■■□□□ 1.41
C9orf3-207ENST00000445181 AURKAO14965 403 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 METTL18O95568 372 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 TNFP01375 233 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 OLIG2Q13516 323 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 C1orf61Q13536 156 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 SPARCL1Q14515 664 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 ADAMTSL4Q6UY14 1074 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 GSTA5Q7RTV2 222 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 MARCH9Q86YJ5 346 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 PDXPQ96GD0 296 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 FGF22Q9HCT0 170 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 HOMER3Q9NSC5 361 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 PCDHGA1Q9Y5H4 931 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.83■■□□□ 1.41
C9orf3-207ENST00000445181 PTPRBP23467 1997 aa23.83■■□□□ 1.41
C9orf3-207ENST00000445181 IGF2RP11717 2491 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 SCAMP1O15126 338 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 INPP4BO15327 924 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 USP12O75317 370 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 SOD1P00441 154 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 ADRA1AP35348 466 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 GNG11P61952 73 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 TCEA2Q15560 299 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 SMAD1Q15797 465 aaKnown RBP23.82■■□□□ 1.4
C9orf3-207ENST00000445181 DOK6Q6PKX4 331 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 RANBP10Q6VN20 620 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 NYAP1Q6ZVC0 841 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 OR4C6Q8NH72 309 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 OR1E3Q8WZA6 343 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 MS4A14Q96JA4 679 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 HIC2Q96JB3 615 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 NAP1L3Q99457 506 aaPredicted RBP23.82■■□□□ 1.4
C9orf3-207ENST00000445181 LRRC61Q9BV99 259 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 SPATA16Q9BXB7 569 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 CDH19Q9H159 772 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 SUDS3Q9H7L9 328 aaPredicted RBP23.82■■□□□ 1.4
C9orf3-207ENST00000445181 LRRC40Q9H9A6 602 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 CYP4F12Q9HCS2 524 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 BPIFA1Q9NP55 256 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 MRPL40Q9NQ50 206 aaKnown RBP23.82■■□□□ 1.4
C9orf3-207ENST00000445181 NLGN3Q9NZ94 848 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 DOLKQ9UPQ8 538 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 CSNK1G3Q9Y6M4 447 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 PLXNB3Q9ULL4 1909 aa23.82■■□□□ 1.4
C9orf3-207ENST00000445181 FAM149AA5PLN7 773 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 TNFRSF10CO14798 259 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 PSMD3O43242 534 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 SIGLEC6O43699 453 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 RFPL3O75679 317 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 CAPNS1P04632 268 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 ELOCQ15369 112 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 HENMT1Q5T8I9 393 aaKnown RBP23.81■■□□□ 1.4
C9orf3-207ENST00000445181 DRICH1Q6PGQ1 229 aaPredicted RBP23.81■■□□□ 1.4
C9orf3-207ENST00000445181 RASGEF1CQ8N431 466 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 GPR26Q8NDV2 337 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 TBATAQ96M53 351 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 OSBPL9Q96SU4 736 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 DUSP23Q9BVJ7 150 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 DRG1Q9Y295 367 aaKnown RBP23.81■■□□□ 1.4
C9orf3-207ENST00000445181 DGKBQ9Y6T7 804 aa23.81■■□□□ 1.4
C9orf3-207ENST00000445181 PRSS38A1L453 326 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 SRRM3A6NNA2 597 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-207ENST00000445181 E7EVH7 732 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 TRIM38O00635 465 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 ANXA6P08133 673 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 ETS1P14921 441 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 HMGCLP35914 325 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 LMAN1P49257 510 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 ACADVLP49748 655 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 DEFB133Q30KQ1 61 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 TRIM74Q86UV6 250 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 FSTL5Q8N475 847 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-207ENST00000445181 PDCD7Q8N8D1 485 aaKnown RBP23.8■■□□□ 1.4
C9orf3-207ENST00000445181 WDR24Q96S15 920 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 ZSCAN5AQ9BUG6 496 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 CARS2Q9HA77 564 aaKnown RBP23.8■■□□□ 1.4
C9orf3-207ENST00000445181 SNX12Q9UMY4 172 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 PKP3Q9Y446 797 aa23.8■■□□□ 1.4
C9orf3-207ENST00000445181 PGRMC1O00264 195 aaKnown RBP23.79■■□□□ 1.4
C9orf3-207ENST00000445181 ASMTLO95671 621 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 CEACAM5P06731 702 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 CDK4P11802 303 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 BPIP17213 487 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 CKMT2P17540 419 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 FDFT1P37268 417 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 KCNJ1P48048 391 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 DCDC1P59894 354 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 KCTD16Q68DU8 428 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 PRUNE1Q86TP1 453 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 TMPRSS12Q86WS5 348 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 TTC30BQ8N4P2 665 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 COG1Q8WTW3 980 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 AP1M1Q9BXS5 423 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 FRMD8Q9BZ67 464 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-207ENST00000445181 CCDC86Q9H6F5 360 aaKnown RBP23.79■■□□□ 1.4
C9orf3-207ENST00000445181 PAK5Q9P286 719 aa23.79■■□□□ 1.4
C9orf3-207ENST00000445181 FEZ2Q9UHY8 353 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-207ENST00000445181 TMEM98Q9Y2Y6 226 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms