RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 RPS24P62847 133 aaKnown RBP16.22■□□□□ 0.19
PIKFYVE-206ENST00000443896 CYTH1Q15438 398 aa16.22■□□□□ 0.19
PIKFYVE-206ENST00000443896 HECTD3Q5T447 861 aa16.22■□□□□ 0.19
PIKFYVE-206ENST00000443896 TMEM214Q6NUQ4 689 aaKnown RBP16.22■□□□□ 0.19
PIKFYVE-206ENST00000443896 L3HYPDHQ96EM0 354 aa16.22■□□□□ 0.19
PIKFYVE-206ENST00000443896 MARK4Q96L34 752 aa16.22■□□□□ 0.19
PIKFYVE-206ENST00000443896 GSTO2Q9H4Y5 243 aa16.22■□□□□ 0.19
PIKFYVE-206ENST00000443896 UBA2Q9UBT2 640 aaPredicted RBP16.22■□□□□ 0.19
PIKFYVE-206ENST00000443896 TMA7Q9Y2S6 64 aaKnown RBP16.22■□□□□ 0.19
PIKFYVE-206ENST00000443896 PIRTP0C851 137 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 GSTT2P0CG29 244 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 GSTT2BP0CG30 244 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 OR1D2P34982 312 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 NFKB2Q00653 900 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 CHSY3Q70JA7 882 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 DENND1CQ8IV53 801 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 AFAP1L2Q8N4X5 818 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 OR4L1Q8NH43 312 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 PLD4Q96BZ4 506 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 NSMCE3Q96MG7 304 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 DCUN1D5Q9BTE7 237 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 TRMOQ9BU70 441 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 CINPQ9BW66 212 aaPredicted RBP16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 POPDC3Q9HBV1 291 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 CATSPERZQ9NTU4 200 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 VPS28Q9UK41 221 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 BACE2Q9Y5Z0 518 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 HTR3EA5X5Y0 456 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 CLDN11O75508 207 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 RPL17P18621 184 aaKnown RBP16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 ENTPD1P49961 510 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 CLCN2P51788 898 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 TYSND1Q2T9J0 566 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 USP41Q3LFD5 358 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 RPS27LQ71UM5 84 aaKnown RBP16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 DHDDSQ86SQ9 333 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 RCN3Q96D15 328 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 STK39Q9UEW8 545 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 KLKB1P03952 638 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 CD1DP15813 335 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 CR2P20023 1033 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 RGRP47804 291 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 CD97P48960 835 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 STC1P52823 247 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 RFTN1Q14699 578 aaPredicted RBP16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 DEFB115Q30KQ5 88 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 PTERQ96BW5 349 aa16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 POLR3BQ9NW08 1133 aaPredicted RBP16.21■□□□□ 0.19
PIKFYVE-206ENST00000443896 SLC4A1P02730 911 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 SMIM18P0DKX4 95 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 HSPA1AP0DMV8 641 aaKnown RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 HSPA1BP0DMV9 641 aaKnown RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 HMGA1P17096 107 aaKnown RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 ZNF140P52738 457 aaPredicted RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 TLR1Q15399 786 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 ZNF678Q5SXM1 525 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 TMIGD2Q96BF3 282 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 CDKN2AIPNLQ96HQ2 116 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 SERPINI1Q99574 410 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 SPON2Q9BUD6 331 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 VN1R3Q9BXE9 311 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 NLE1Q9NVX2 485 aaPredicted RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 SMIM31A0A1B0GVY4 71 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 ILVBLA1L0T0 632 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 STC2O76061 302 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 CRTAMO95727 393 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 C1QTNF8P60827 252 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 AMIGO2Q86SJ2 522 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 KBTBD6Q86V97 674 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 PGAM4Q8N0Y7 254 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 GALNT4Q8N4A0 578 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 CWH43Q9H720 699 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 MRGBPQ9NV56 204 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 ARIH1Q9Y4X5 557 aaPredicted RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 SPO11Q9Y5K1 396 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 UBFD1O14562 309 aaKnown RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 INSIG1O15503 277 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 ZNF37AP17032 561 aaPredicted RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 CORO1AP31146 461 aaKnown RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 MSX2P35548 267 aaPredicted RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 ALDH7A1P49419 539 aaKnown RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 SGSHP51688 502 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 BNC2Q6ZN30 1099 aaPredicted RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 CHST9Q7L1S5 443 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 SCLYQ96I15 445 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 AARSD1Q9BTE6 412 aaKnown RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 EFCAB1Q9HAE3 211 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 INTS10Q9NVR2 710 aaKnown RBP16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 FIS1Q9Y3D6 152 aa16.2■□□□□ 0.18
PIKFYVE-206ENST00000443896 TCAF2A6NFQ2 919 aa16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 TRMUO75648 421 aaKnown RBP16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 SEC24AO95486 1093 aa16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 PSMA3P25788 255 aa16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 ATP1A4Q13733 1029 aa16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 PIGGQ5H8A4 983 aa16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 UTS2BQ765I0 119 aa16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 PATL1Q86TB9 770 aaKnown RBP16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 TRPC7Q9HCX4 862 aa16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 AFF4Q9UHB7 1163 aaKnown RBP16.19■□□□□ 0.18
PIKFYVE-206ENST00000443896 TMEM98Q9Y2Y6 226 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms