RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ERCC2P18074 760 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 TNFAIP3P21580 790 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 COPB1P53618 953 aaKnown RBP14.29□□□□□ -0.12
HMGN1-208ENST00000443046 PMS2P54278 862 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 HHEXQ03014 270 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 TRAF2Q12933 501 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 PTPRRQ15256 657 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 CAMK4Q16566 473 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 HSP90AA4PQ58FG1 418 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 TMCO4Q5TGY1 634 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 IYDQ6PHW0 289 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 RFLNAQ6ZTI6 216 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 RFX8Q6ZV50 586 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 TSPAN33Q86UF1 283 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 TP53INP2Q8IXH6 220 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 PGBD5Q8N414 524 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 LZTR1Q8N653 840 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 ARFGAP1Q8N6T3 406 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 PAF1Q8N7H5 531 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 SSC4DQ8WTU2 575 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 MCEEQ96PE7 176 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 NUDCD1Q96RS6 583 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 ABCG8Q9H221 673 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 SP110Q9HB58 689 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 NOD2Q9HC29 1040 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 VPS4AQ9UN37 437 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 AP4E1Q9UPM8 1137 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 PCDHB3Q9Y5E6 796 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 PCDHGA6Q9Y5G7 932 aa14.29□□□□□ -0.12
HMGN1-208ENST00000443046 PCYT1BQ9Y5K3 369 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-208ENST00000443046 MN1Q10571 1320 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-208ENST00000443046 GOLGA6L3A6NEY3 463 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 DFFAO00273 331 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 EPHB6O15197 1021 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 DNAJC6O75061 913 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 SEMA7AO75326 666 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 RFPL1O75677 317 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 C9P02748 559 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 ZNF28P17035 718 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 NFKBIAP25963 317 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 DLSTP36957 453 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 HSPA9P38646 679 aaKnown RBP14.28□□□□□ -0.12
HMGN1-208ENST00000443046 GPR1P46091 355 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 KLK7P49862 253 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 PTSQ03393 145 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 ERV3-1Q14264 604 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 DNAJC24Q6P3W2 148 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 C6orf15Q6UXA7 325 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-208ENST00000443046 OTOGQ6ZRI0 2925 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 CYP4V2Q6ZWL3 525 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-208ENST00000443046 ZNF765Q7L2R6 523 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 TRIM74Q86UV6 250 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 APLFQ8IW19 511 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-208ENST00000443046 FNIP1Q8TF40 1166 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 PIH1D2Q8WWB5 315 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 SH3KBP1Q96B97 665 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 KCTD15Q96SI1 283 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-208ENST00000443046 MGME1Q9BQP7 344 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 EPB41L1Q9H4G0 881 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 CUEDC1Q9NWM3 386 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-208ENST00000443046 TBC1D29Q9UFV1 150 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 CROTQ9UKG9 612 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 POLHQ9Y253 713 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 FBN2P35556 2912 aa14.28□□□□□ -0.12
HMGN1-208ENST00000443046 TNRC6AQ8NDV7 1962 aaKnown RBP14.27□□□□□ -0.12
HMGN1-208ENST00000443046 ZNF106Q9H2Y7 1883 aaKnown RBP14.27□□□□□ -0.12
HMGN1-208ENST00000443046 A0A0U1RQS6 177 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 GOLGA6CA6NDK9 693 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 GOLGA6BA6NDN3 693 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 PGLSO95336 258 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 GOLGA6DP0CG33 693 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 HCAR3P49019 387 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 POLR2FP61218 127 aaKnown RBP14.27□□□□□ -0.13
HMGN1-208ENST00000443046 NFATC2Q13469 925 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 DPYSQ14117 519 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 TCP11X2Q5H9J9 407 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 RALGPS1Q5JS13 557 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 ERMARDQ5T6L9 678 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 TMEM135Q86UB9 458 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 GALNT13Q8IUC8 556 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 PDCD6IPQ8WUM4 868 aaKnown RBP14.27□□□□□ -0.13
HMGN1-208ENST00000443046 SCAMP4Q969E2 229 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 AP2M1Q96CW1 435 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 PEBP4Q96S96 227 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 AGAP2Q99490 1192 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 ULBP3Q9BZM4 244 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 ZMYND15Q9H091 742 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 DHX35Q9H5Z1 703 aaKnown RBP14.27□□□□□ -0.13
HMGN1-208ENST00000443046 SAMSN1Q9NSI8 373 aaKnown RBP14.27□□□□□ -0.13
HMGN1-208ENST00000443046 GOLGA6AQ9NYA3 693 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 CD84Q9UIB8 345 aa14.27□□□□□ -0.13
HMGN1-208ENST00000443046 ANKRD62A6NC57 917 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 PES1O00541 588 aaKnown RBP14.26□□□□□ -0.13
HMGN1-208ENST00000443046 FZD6O60353 706 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 EEF1GP26641 437 aaKnown RBP14.26□□□□□ -0.13
HMGN1-208ENST00000443046 MARK2Q7KZI7 788 aaKnown RBP14.26□□□□□ -0.13
HMGN1-208ENST00000443046 LYSMD3Q7Z3D4 306 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 SLC9B2Q86UD5 537 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 CPT1CQ8TCG5 803 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 C9orf72Q96LT7 481 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms