RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 MBNL1Q9NR56 388 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-207ENST00000441725 TCP11L1Q9NUJ3 509 aa4.14□□□□□ -1.75
CDC42BPA-207ENST00000441725 HAO2Q9NYQ3 351 aa4.14□□□□□ -1.75
CDC42BPA-207ENST00000441725 SPATA7Q9P0W8 599 aa4.14□□□□□ -1.75
CDC42BPA-207ENST00000441725 EXO1Q9UQ84 846 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-207ENST00000441725 PIPSLA2A3N6 862 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC69A6NI79 296 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 OR6C76A6NM76 312 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 EBAG9O00559 213 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZC3H11AO75152 810 aaKnown RBP eCLIP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 GCATO75600 419 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 SUPT20HL2P0C7V6 817 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 FERP16591 822 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CHRNA5P30532 468 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CXCR3P49682 368 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CLCN5P51795 746 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 TGFB2P61812 414 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 TRDNQ13061 729 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 SHBQ15464 509 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 SUPT20HL1Q3ZLR7 823 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 KIAA1755Q5JYT7 1200 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 C6orf141Q5SZD1 244 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 AKNAD1Q5T1N1 836 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 C6orf163Q5TEZ5 329 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 ABHD17BQ5VST6 288 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 SFMBT2Q5VUG0 894 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 WDR73Q6P4I2 378 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 VSTM1Q6UX27 236 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 Q6ZNX1 250 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 RUFY3Q7L099 469 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 PPP1R42Q7Z4L9 355 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 IQCHQ86VS3 1027 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 GUF1Q8N442 669 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CAMKVQ8NCB2 501 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 FIBINQ8TAL6 211 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 BICD1Q96G01 975 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 TCEANC2Q96MN5 208 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 FCRL5Q96RD9 977 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 SEPT5Q99719 369 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 MXRA8Q9BRK3 442 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 FUT8Q9BYC5 575 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 TMEM165Q9HC07 324 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 MAGEE1Q9HCI5 957 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 AURKAIP1Q9NWT8 199 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 ADPRHL2Q9NX46 363 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 DDX43Q9NXZ2 648 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 MAU2Q9Y6X3 613 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZNF644Q9H582 1327 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 WIPF3A6NGB9 483 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 PRPF4O43172 522 aaKnown RBP eCLIP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZBTB14O43829 449 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 NMT2O60551 498 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZNF254O75437 659 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CAMTA2O94983 1202 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 NFATC1O95644 943 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CD63P08962 238 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 SRD5A1P18405 259 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 TFEBP19484 476 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 DRD4P21917 467 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 PTGER1P34995 402 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 GRIA3P42263 894 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 TFAP4Q01664 338 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 KLF10Q13118 480 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 TCTN1Q2MV58 587 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 SOWAHCQ53LP3 525 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 DAB2IPQ5VWQ8 1189 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC80Q76M96 950 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC25Q86WR0 208 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 PEX5LQ8IYB4 626 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCAR2Q8N163 923 aaKnown RBP4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 GJC3Q8NFK1 279 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC148Q8NFR7 591 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CFAP61Q8NHU2 1237 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 HUS1BQ8NHY5 278 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 SEPT1Q8WYJ6 367 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 EXOC4Q96A65 974 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CABS1Q96KC9 395 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 TMEM47Q9BQJ4 181 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 SLC25A23Q9BV35 468 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZNF341Q9BYN7 854 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 WDR11Q9BZH6 1224 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 PCED1AQ9H1Q7 454 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 VCPKMTQ9H867 229 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 OLAHQ9NV23 265 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 FZD1Q9UP38 647 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 LIPGQ9Y5X9 500 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 CEPT1Q9Y6K0 416 aa4.13□□□□□ -1.75
CDC42BPA-207ENST00000441725 ADGRL1O94910 1474 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 DNM1LO00429 736 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 PSMD14O00487 310 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 PLSCR1O15162 318 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 KLK8O60259 260 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 ATP2C2O75185 946 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 RTN2O75298 545 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 EPN2O95208 641 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 SMC2O95347 1197 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 STAMBPO95630 424 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 PCNAP12004 261 aa4.12□□□□□ -1.75
CDC42BPA-207ENST00000441725 YWHAQP27348 245 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms