RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 TLR9Q9NR96 1032 aa5.9□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TMEM184CQ9NVA4 438 aa5.9□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SMPD3Q9NY59 655 aaPredicted RBP5.9□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SENP1Q9P0U3 644 aa5.9□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 EBF1Q9UH73 591 aa5.9□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 HSF4Q9ULV5 492 aa5.9□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 LYVE1Q9Y5Y7 322 aa5.9□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 UTYO14607 1347 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TNS3Q68CZ2 1445 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ABCC6O95255 1503 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ZNF839A8K0R7 811 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 STX16O14662 325 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PCDH17O14917 1159 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 BIRC5O15392 142 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PEX1O43933 1283 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GUCY1B2O75343 617 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 KCNK5O95279 499 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CLEC3BP05452 202 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GRPP07492 148 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FHP07954 510 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CLTAP09496 248 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 RALBP11234 206 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ODC1P11926 461 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MYL6BP14649 208 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CPA1P15085 419 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CHN1P15882 459 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GUCY1A2P33402 732 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MDH1P40925 334 aaKnown RBP5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TXKP42681 527 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MAGEA1P43355 309 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MLLT6P55198 1093 aaPredicted RBP5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 BPIFB4P59827 614 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SCN1BQ07699 218 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 NFIL3Q16649 462 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ANKRD20A4Q4UJ75 823 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ANKRD20A2Q5SQ80 823 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FAM69AQ5T7M9 428 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ATAD3BQ5T9A4 648 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ANKRD20A1Q5TYW2 823 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ANKRD20A3Q5VUR7 823 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CYP20A1Q6UW02 462 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TRIM72Q6ZMU5 477 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 H1FNTQ75WM6 255 aaPredicted RBP5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SYT13Q7L8C5 426 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 IRF2BP1Q8IU81 584 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SIX6OS1Q8N1H7 587 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 BBS1Q8NFJ9 593 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FBXO32Q969P5 355 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CHMP6Q96FZ7 201 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PIWIL1Q96J94 861 aaKnown RBP5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PANX2Q96RD6 677 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 KCNK16Q96T55 309 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 AIFM2Q9BRQ8 373 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MRPL37Q9BZE1 423 aaKnown RBP5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GPR61Q9BZJ8 451 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MS4A7Q9GZW8 240 aaPredicted RBP5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ECHDC1Q9NTX5 307 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ABCB8Q9NUT2 735 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CYTH4Q9UIA0 394 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PLAGL2Q9UPG8 496 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PPP2R2CQ9Y2T4 447 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PLEKHM1Q9Y4G2 1056 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 COL18A1P39060 1754 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CRYBG1Q9Y4K1 1723 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 KDM6AO15550 1401 aaPredicted RBP5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PITPNM2Q9BZ72 1349 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 STRCP1A6NGW2 1772 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 A0A1W2PPW3 197 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GNB5O14775 395 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 RAD51BO15315 384 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ADCY6O43306 1168 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MED7O43513 233 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 GCATO75600 419 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MMP2P08253 660 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 KRT3P12035 628 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TPH1P17752 444 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FPR1P21462 350 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CPT2P23786 658 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PTAFRP25105 342 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 KLRK1P26718 216 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ACADSBP45954 432 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 HSPA13P48723 471 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TSPAN5P62079 268 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 FAM189BP81408 668 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TSTA3Q13630 321 aaPredicted RBP5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 SEC23BQ15437 767 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CHRNA6Q15825 494 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MOGQ16653 247 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ME3Q16798 604 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CCDC142Q17RM4 750 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ZNF628Q5EBL2 1059 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 CFAP157Q5JU67 520 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PLAG1Q6DJT9 500 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 TMEM270Q6UE05 265 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 AFTPHQ6ULP2 937 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MFSD7Q6UXD7 560 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 MACC1Q6ZN28 852 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 PRR23CQ6ZRP0 262 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ZNF365Q70YC5 407 aa5.89□□□□□ -1.47
ALMS1-IT1-201ENST00000441587 ZNF554Q86TJ5 538 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms