RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CLEC4FQ8N1N0 589 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 TMEM125Q96AQ2 219 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 KCNA7Q96RP8 456 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 EHD1Q9H4M9 534 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 ATP13A3Q9H7F0 1226 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 SLAMF8Q9P0V8 285 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 OTOFQ9HC10 1997 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 CLDN5O00501 218 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 PIP5K1BO14986 540 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 LSM3P62310 102 aaKnown RBP20.23■□□□□ 0.83
SHOX2-203ENST00000441443 SH3BP2P78314 561 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 TRIM32Q13049 653 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 NFYCQ13952 458 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 PARP8Q8N3A8 854 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 CCDC126Q96EE4 140 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 PSD2Q9BQI7 771 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 PCDHGA11Q9Y5H2 935 aa20.23■□□□□ 0.83
SHOX2-203ENST00000441443 CCL15-CCL14A0A0B4J2E2 113 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 GMNNO75496 209 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 BEST1O76090 585 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 LTA4HP09960 611 aaKnown RBP20.22■□□□□ 0.83
SHOX2-203ENST00000441443 ALDH4A1P30038 563 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 CHRNA4P43681 627 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 ACADSBP45954 432 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 ATP4BP51164 291 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 CCNA1P78396 465 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 CLCQ05315 142 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 CCL15Q16663 113 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 GABPB2Q8TAK5 448 aaPredicted RBP20.22■□□□□ 0.83
SHOX2-203ENST00000441443 BIRC7Q96CA5 298 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 FICDQ9BVA6 458 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 AKIP1Q9NQ31 210 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 BAG5Q9UL15 447 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 BTRCQ9Y297 605 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 LRRC14BA6NHZ5 514 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 HTR1AP08908 422 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 TCEA1P23193 301 aaKnown RBP20.22■□□□□ 0.83
SHOX2-203ENST00000441443 SCNN1AP37088 669 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 POU4F1Q01851 419 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 SELENBP1Q13228 472 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 MEP1AQ16819 746 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 STK32CQ86UX6 486 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 ANKRD13BQ86YJ7 626 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 OR6J1Q8NGC5 347 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 WNT8BQ93098 351 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.22■□□□□ 0.83
SHOX2-203ENST00000441443 TUBGCP3Q96CW5 907 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 TBL1YQ9BQ87 522 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 C8orf4Q9NR00 106 aa20.22■□□□□ 0.83
SHOX2-203ENST00000441443 H0YAE9 185 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 INMTO95050 263 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 SMPD1P17405 629 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 TGM1P22735 817 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 GSTM2P28161 218 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 LEPRP48357 1165 aaKnown RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 ARSFP54793 590 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 AGAP7PQ5VUJ5 663 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 ARHGAP36Q6ZRI8 547 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 LINC00523Q86TU6 105 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 Q8N9G6 341 aaPredicted RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 C2CD4AQ8NCU7 369 aaPredicted RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 PPTC7Q8NI37 304 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 HDAC11Q96DB2 347 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 IL12RB2Q99665 862 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 GMIPQ9P107 970 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 EVLQ9UI08 416 aaPredicted RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 PTGES3LE9PB15 166 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 DAB1O75553 588 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 SIX3O95343 332 aaPredicted RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 SNAI1O95863 264 aaPredicted RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 LINC00032P0C843 101 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 DIO3P55073 304 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 TPD52P55327 224 aaPredicted RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 DPY19L1Q2PZI1 675 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 PAGE2BQ5JRK9 111 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 THAP5Q7Z6K1 395 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 CTU1Q7Z7A3 348 aaKnown RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 GOLM1Q8NBJ4 401 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 PPHLN1Q8NEY8 458 aaKnown RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 NSMCE3Q96MG7 304 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 STAP1Q9ULZ2 295 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 PCDHGA8Q9Y5G5 932 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 HGFP14210 728 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 IMPDH1P20839 514 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 NKX2-5P52952 324 aaPredicted RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 MAPRE1Q15691 268 aaKnown RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 INAQ16352 499 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 NOMO2Q5JPE7 1267 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 PAGE3Q5JUK9 113 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 ZNF678Q5SXM1 525 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 LDB1Q86U70 411 aaPredicted RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 RYBPQ8N488 228 aaPredicted RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 SH3RF2Q8TEC5 729 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 HSFY1Q96LI6 401 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 BDH2Q9BUT1 245 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 WDR12Q9GZL7 423 aaKnown RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 CCDC90BQ9GZT6 254 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 NXF3Q9H4D5 531 aaKnown RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 NTN4Q9HB63 628 aa20.21■□□□□ 0.83
SHOX2-203ENST00000441443 GOLGA2P5Q9HBQ8 144 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms