RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 HERC3Q15034 1050 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 MTX3Q5HYI7 312 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 VARS2Q5ST30 1063 aaKnown RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 KHDRBS2Q5VWX1 349 aaKnown RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 RHBDF2Q6PJF5 856 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 CPSF7Q8N684 471 aaKnown RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 ZNF614Q8N883 585 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 FAM13CQ8NE31 585 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 NXNL1Q96CM4 212 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 MARK4Q96L34 752 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 EVA1BQ9NVM1 165 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 SAMD4AQ9UPU9 718 aaKnown RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 A0A0J9YYE9 177 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 NPEPPSL1A6NEC2 478 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 IRAK2O43187 625 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 ATG13O75143 517 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 POP4O95707 220 aaKnown RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 C1RP00736 705 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 ELFN1P0C7U0 828 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 TCF3P15923 654 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 GSTM5P46439 218 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 INCA1Q0VD86 236 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 LCP2Q13094 533 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 TRAF3Q13114 568 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 ZNHIT3Q15649 155 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 USP39Q53GS9 565 aaKnown RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 NAIF1Q69YI7 327 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 FAM151BQ6UXP7 276 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 RAVER1Q8IY67 606 aaKnown RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 ZCCHC7Q8N3Z6 543 aaKnown RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 CPA6Q8N4T0 437 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 ATAD1Q8NBU5 361 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 DNAJB14Q8TBM8 379 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 BTN2A2Q8WVV5 523 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 SUSD3Q96L08 255 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 TDRD1Q9BXT4 1180 aaKnown RBP6.38□□□□□ -1.39
CNOT1-202ENST00000441024 CAPN10Q9HC96 672 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 HMG20AQ9NP66 347 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 PRDM8Q9NQV8 689 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 CLIC5Q9NZA1 410 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 RAB26Q9ULW5 256 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 CNTN6Q9UQ52 1028 aa6.38□□□□□ -1.39
CNOT1-202ENST00000441024 IRGMA1A4Y4 181 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 A8MX80 341 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 H3BN98 237 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 SIN3BO75182 1162 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 SERPINB7O75635 380 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 NFATC1O95644 943 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 PRNPP04156 253 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 USP4Q13107 963 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 FASTKD3Q14CZ7 662 aaKnown RBP6.37□□□□□ -1.39
CNOT1-202ENST00000441024 SULT1C3Q6IMI6 304 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 FAM92BQ6ZTR7 304 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 RELL1Q8IUW5 271 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 C19orf18Q8NEA5 215 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 MAGEE2Q8TD90 523 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-202ENST00000441024 OR52E6Q96RD3 313 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 ZNF607Q96SK3 696 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 OLFM1Q99784 485 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 SYT17Q9BSW7 474 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 NMUR2Q9GZQ4 415 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 GTF2IRD1Q9UHL9 959 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 PRDM4Q9UKN5 801 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 UTRNP46939 3433 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 MYBPHLA2RUH7 354 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 RFXANKO14593 260 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 FFAR3O14843 346 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 GPR42O15529 346 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 FAM155BO75949 473 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 SLC25A14O95258 325 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-202ENST00000441024 SLC35G4P0C7Q5 338 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 LMO2P25791 158 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 HTR1BP28222 390 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 POLR2JP52435 117 aaKnown RBP6.37□□□□□ -1.39
CNOT1-202ENST00000441024 SLC7A2P52569 658 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 DSC2Q02487 901 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 NEDD8Q15843 81 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 RFTN2Q52LD8 501 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-202ENST00000441024 GPR158Q5T848 1215 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 FSTL4Q6MZW2 842 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 SLC39A4Q6P5W5 647 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 GALNT18Q6P9A2 607 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 GCNT7Q6ZNI0 430 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 CLEC20AQ6ZU45 233 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 CHSY3Q70JA7 882 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 DET1Q7L5Y6 550 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 RASAL3Q86YV0 1011 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 EPHX4Q8IUS5 362 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 PPP1R13LQ8WUF5 828 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 LRRN4Q8WUT4 740 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 CXorf40BQ96DE9 158 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 HMCESQ96FZ2 354 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 BORCS6Q96GS4 357 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 TEFMQ96QE5 360 aaKnown RBP6.37□□□□□ -1.39
CNOT1-202ENST00000441024 UNC93B1Q9H1C4 597 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 TFB2MQ9H5Q4 396 aaKnown RBP6.37□□□□□ -1.39
CNOT1-202ENST00000441024 CLK4Q9HAZ1 481 aaKnown RBP6.37□□□□□ -1.39
CNOT1-202ENST00000441024 LRTM1Q9HBL6 345 aa6.37□□□□□ -1.39
CNOT1-202ENST00000441024 ZC4H2Q9NQZ6 224 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms