RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 GTF2H4Q92759 462 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 SNAPC3Q92966 411 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 IRF7Q92985 503 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 USP13Q92995 863 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ISL2Q96A47 359 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 FKBP10Q96AY3 582 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 SGK3Q96BR1 496 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 RTP4Q96DX8 246 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 C11orf24Q96F05 449 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 RADILQ96JH8 1075 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 SERPINB11Q96P15 392 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCDHB18PQ96TA0 734 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 MNTQ99583 582 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 GAL3ST1Q99999 423 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 TRMOQ9BU70 441 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF416Q9BWM5 594 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 UGT2B28Q9BY64 529 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ST6GALNAC4Q9H4F1 302 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF385DQ9H6B1 395 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 NARFLQ9H6Q4 476 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 C8orf33Q9H7E9 229 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 C3orf14Q9HBI5 128 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 POPDC2Q9HBU9 364 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 HMX1Q9NP08 348 aaPredicted RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 EIF2B3Q9NR50 452 aaKnown RBP5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCDHB16Q9NRJ7 776 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 SNX15Q9NRS6 342 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CACNA2D2Q9NY47 1150 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 EHD3Q9NZN3 535 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 MORF4L1Q9UBU8 362 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 CD300AQ9UGN4 299 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 OSGIN1Q9UJX0 560 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ADAM30Q9UKF2 790 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 TRHDEQ9UKU6 1024 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 RAB23Q9ULC3 237 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNRF3Q9ULT6 936 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 OAZ3Q9UMX2 235 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCDHGB4Q9UN71 923 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 ING4Q9UNL4 249 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 USTQ9Y2C2 406 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCDHGB6Q9Y5F9 930 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCDHGB5Q9Y5G0 923 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCDHGA7Q9Y5G6 932 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 AUP1Q9Y679 476 aa5.6□□□□□ -1.51
VTI1BP4-201ENST00000427516 NHSL1Q5SYE7 1610 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 A0A1W2PQ67 120 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ERVV-1B6SEH8 477 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 I3L521 148 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 K7ENM7 598 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 NFIBO00712 420 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF195O14628 629 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 EI24O14681 340 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TSPAN4O14817 238 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 UBDO15205 165 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZBTB14O43829 449 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 NRP2O60462 931 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GMDSO60547 372 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 FOXD2O60548 495 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 CST8O60676 142 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 PSIP1O75475 530 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TIPRLO75663 272 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 OR2B3O76000 313 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ALDH1A2O94788 518 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLITRK3O94933 977 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 IL18RAPO95256 599 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 KCNH1O95259 989 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SNAPINO95295 136 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 LDOC1O95751 146 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TOP3BO95985 862 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TNNC2P02585 160 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 FTH1P02794 183 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 PRKCBP05771 671 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 POLBP06746 335 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SYN1P17600 705 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ITGB6P18564 788 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZP3P21754 424 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 RORAP35398 523 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GJC1P36383 396 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TPMTP51580 245 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ARHGDIAP52565 204 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 DGKQP52824 942 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 NKX2-5P52952 324 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ARSFP54793 590 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 CDH13P55290 713 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SNX16P57768 344 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 EEFSECP57772 596 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GPLD1P80108 840 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 MS4A2Q01362 244 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 CTBSQ01459 385 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TEKQ02763 1124 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 RGS1Q08116 209 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GPR50Q13585 617 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 QPRTQ15274 297 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 VPS72Q15906 364 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 CA9Q16790 459 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SPANXN3Q5MJ09 141 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 LDLRAP1Q5SW96 308 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 MPP7Q5T2T1 576 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SYT6Q5T7P8 510 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 PPP1R26Q5T8A7 1209 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms