RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 BNIP3Q12983 259 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC36A3Q495N2 470 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 FGD3Q5JSP0 725 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PAGE3Q5JUK9 113 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 INTS11Q5TA45 600 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 OVOS1Q6IE37 1185 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 AGMOQ6ZNB7 445 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 LYSMD3Q7Z3D4 306 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 MIB1Q86YT6 1006 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 FBXO39Q8N4B4 442 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 MYRFLQ96LU7 910 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 BIRC8Q96P09 236 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 SEMA3CQ99985 751 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ACBD6Q9BR61 282 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 AP5M1Q9H0R1 490 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 HIPK3Q9H422 1215 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ALG2Q9H553 416 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ABI2Q9NYB9 513 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.5□□□□□ -1.217e-7■■■□□ 17.9
SMARCC1-202ENST00000425518 WDR90Q96KV7 1748 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PLXNA1Q9UIW2 1896 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 CAPN15O75808 1086 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TBX18O95935 607 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 LDLRP01130 860 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 RPS9P46781 194 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 CCT8P50990 548 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TSPY1Q01534 308 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 SEMA3AQ14563 771 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 RAB39AQ14964 217 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 UPP1Q16831 310 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TIGD2Q4W5G0 525 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TMTC4Q5T4D3 741 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PIK3R6Q5UE93 754 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 MANEALQ5VSG8 457 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 MRNIPQ6NTE8 343 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TMEM214Q6NUQ4 689 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PAQR3Q6TCH7 311 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PATL1Q86TB9 770 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TRIM74Q86UV6 250 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TRIM73Q86UV7 250 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 BBS5Q8N3I7 341 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PACRGLQ8N7B6 248 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 GPR152Q8TDT2 470 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 SEPT8Q92599 483 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ITFG2Q969R8 447 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.5□□□□□ -1.212e-6■■■■■ 54.9
SMARCC1-202ENST00000425518 FEM1CQ96JP0 617 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ARNT2Q9HBZ2 717 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 POLR3BQ9NW08 1133 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 SMPD3Q9NY59 655 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 PKD2L2Q9NZM6 624 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 ANAPC2Q9UJX6 822 aa7.5□□□□□ -1.21
SMARCC1-202ENST00000425518 A0A0G2JMZ2 1700 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 LRRC37A2A6NM11 1700 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 TTC3P53804 2025 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ACOX3O15254 700 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 LDB2O43679 373 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 IGLV3-25P01717 112 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 MTHFD2P13995 350 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 HSD17B1P14061 328 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 CD247P20963 164 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 VARSP26640 1264 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 AGTR2P50052 363 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 EFEMP1Q12805 493 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 TRAF2Q12933 501 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 TSNQ15631 228 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC14A2Q15849 920 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ATP6AP1Q15904 470 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 DDR2Q16832 855 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ANKS6Q68DC2 871 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 LCN8Q6JVE9 175 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 FAM171BQ6P995 826 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 BLOC1S3Q6QNY0 202 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ZNF554Q86TJ5 538 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 CROCCP3Q8IVE0 287 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 DCP1BQ8IZD4 617 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 THEM5Q8N1Q8 247 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 PDZD8Q8NEN9 1154 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 PLEKHG4BQ96PX9 1271 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 HBEGFQ99075 208 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 MTG1Q9BT17 334 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 CCDC68Q9H2F9 335 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 SDR39U1Q9NRG7 319 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 HACD3Q9P035 362 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ABCD2Q9UBJ2 740 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 DOLKQ9UPQ8 538 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 LOC285556D6RIA3 1793 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 SH3PXD2BA1X283 911 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 CCDC154A6NI56 674 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 H3BMQ9 156 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 NOL3O60936 208 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 RASAL1O95294 804 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 PEX11BO96011 259 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ITGB1P05556 798 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 MMP2P08253 660 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 FGF4P08620 206 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 IDO1P14902 403 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 HMOX2P30519 316 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 CAPGP40121 348 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms