RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 SIX4Q9UIU6 781 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 ENPP5Q9UJA9 477 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 TRPC5OSA6NMA1 111 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 NDUFS2O75306 463 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 RGS20O76081 388 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 CAP2P40123 477 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 DIO3P55073 304 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SOWAHCQ53LP3 525 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF789Q5FWF6 425 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 NEK5Q6P3R8 708 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ZC3HC1Q86WB0 502 aaKnown RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM20CQ8IXL6 584 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 TTC30BQ8N4P2 665 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ESX1Q8N693 406 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 NATD1Q8N6N6 113 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 PACRGLQ8N7B6 248 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SH3RF2Q8TEC5 729 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 FRS2Q8WU20 508 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 KHSRPQ92945 711 aaKnown RBP eCLIP11.26□□□□□ -0.613e-12■■□□□ 11.7
SEC61A1-202ENST00000424880 TMBIM1Q969X1 311 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 IL22Q9GZX6 179 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 TNKS2Q9H2K2 1166 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 MYOZ2Q9NPC6 264 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 C14orf119Q9NWQ9 140 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC2A6Q9UGQ3 507 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SATB2Q9UPW6 733 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 BRCA2P51587 3418 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 CCL22O00626 93 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ZBTB24O43167 697 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 LINC00032P0C843 101 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 CASP3P42574 277 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 PSMD8P48556 350 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 AP3M2P53677 418 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 EMX1Q04741 257 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC12A1Q13621 1099 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SQLEQ14534 574 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SYT16Q17RD7 645 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 AAK1Q2M2I8 961 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 GOLGA7BQ2TAP0 167 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 EEF1DP3Q658K8 133 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 RAP1GAP2Q684P5 730 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 NEK10Q6ZWH5 1172 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SPRED1Q7Z699 444 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 GALNT5Q7Z7M9 940 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ERO1BQ86YB8 467 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 NLGN4XQ8N0W4 816 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 GOLM1Q8NBJ4 401 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 RNF149Q8NC42 400 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 TMEM246Q9BRR3 403 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 AKTIPQ9H8T0 292 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 PDE10AQ9Y233 779 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 AREL1O15033 823 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 DAB1O75553 588 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SIX3O95343 332 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ICAM1P05362 532 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 JUNBP17275 347 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ATICP31939 592 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SFNP31947 248 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 MAGEA12P43365 314 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ARCN1P48444 511 aaKnown RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 GSK3BP49841 420 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ARSFP54793 590 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 TAS2R39P59534 338 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ENPEPQ07075 957 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 CD47Q08722 323 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 CDC20Q12834 499 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 RPS6KA2Q15349 733 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SMN1Q16637 294 aaKnown RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SOWAHAQ2M3V2 549 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 RBM20Q5T481 1227 aaKnown RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 NXNL2Q5VZ03 156 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 JADE1Q6IE81 842 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 GRAMD2AQ8IUY3 354 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 LYSMD2Q8IV50 215 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 C1orf127Q8N9H9 656 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ANGPTL6Q8NI99 470 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM149B1Q96BN6 582 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ALG2Q9H553 416 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 ZBTB20Q9HC78 741 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 JPH1Q9HDC5 661 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 CD320Q9NPF0 282 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 MRPL40Q9NQ50 206 aaKnown RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 PAQR5Q9NXK6 330 aaPredicted RBP11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SNTG2Q9NY99 539 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 SNX5Q9Y5X3 404 aa11.26□□□□□ -0.61
SEC61A1-202ENST00000424880 A0A0C4DFX4 3053 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 A0A1B0GTL3 188 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM172BPA6NC97 362 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 INO80B-WBP1J3KQ70 363 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 FXYD1O00168 92 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 TEX28O15482 410 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 CRYZL1O95825 349 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 FADS2O95864 444 aaKnown RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 TNNC2P02585 160 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 PSAPP07602 524 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 NR3C2P08235 984 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 PFKMP08237 780 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms