RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RAB2BQ8WUD1 216 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 TMEM40Q8WWA1 233 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 KIAA1191Q96A73 305 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 PTERQ96BW5 349 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 ZNF599Q96NL3 588 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 PKMYT1Q99640 499 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 SLC39A3Q9BRY0 314 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 MUC3BQ9H195 1237 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 ALG2Q9H553 416 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 SYTL2Q9HCH5 934 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 GINS2Q9Y248 185 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 KERAO60938 352 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 KATNA1O75449 491 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 CDH1P12830 882 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 CCNA2P20248 432 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 PLK1P53350 603 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 GABARAPL2P60520 117 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 LIPEQ05469 1076 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 CYP51A1Q16850 503 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 XKR7Q5GH72 579 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 BROXQ5VW32 411 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 MRNIPQ6NTE8 343 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 TXNDC11Q6PKC3 985 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 DCDC5Q6ZRR9 648 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 HOMEZQ8IX15 550 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 TMEM199Q8N511 208 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 MYLPFQ96A32 169 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 FCRL2Q96LA5 508 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-204ENST00000424143 KCTD14Q9BQ13 255 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-204ENST00000424143 DERL2Q9GZP9 239 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 PAIP1Q9H074 479 aaKnown RBP15.17■□□□□ 0.02
C9orf3-204ENST00000424143 MID1IP1Q9NPA3 183 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 RGS18Q9NS28 235 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 POLG2Q9UHN1 485 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 MAGEL2Q9UJ55 1249 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 DSEQ9UL01 958 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 PCDHB3Q9Y5E6 796 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 ANKRD36A6QL64 1941 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 FAM234BA2RU67 622 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 C16orf96A6NNT2 1141 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 ARNTLO00327 626 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 EI24O14681 340 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 RPS17P08708 135 aaKnown RBP15.16■□□□□ 0.02
C9orf3-204ENST00000424143 SLC2A3P11169 496 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 RHOQP17081 205 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 TPP2P29144 1249 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-204ENST00000424143 HOXC8P31273 242 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 SLC5A3P53794 718 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 KCNK10P57789 538 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 TIAL1Q01085 375 aaKnown RBP eCLIP15.16■□□□□ 0.02
C9orf3-204ENST00000424143 NFATC3Q12968 1075 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 TOP3AQ13472 1001 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-204ENST00000424143 GRB7Q14451 532 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 PITRM1Q5JRX3 1037 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 AARS2Q5JTZ9 985 aaKnown RBP15.16■□□□□ 0.02
C9orf3-204ENST00000424143 NIPAL1Q6NVV3 410 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 OR52E4Q8NGH9 312 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 STAG3L4Q8TBR4 150 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 DNAJB3Q8WWF6 145 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 CYGBQ8WWM9 190 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 ACDQ96AP0 544 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 ISG20Q96AZ6 181 aaKnown RBP15.16■□□□□ 0.02
C9orf3-204ENST00000424143 AURKBQ96GD4 344 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-204ENST00000424143 TMEM209Q96SK2 561 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 UNKQ9C0B0 810 aaKnown RBP15.16■□□□□ 0.02
C9orf3-204ENST00000424143 TUBB1Q9H4B7 451 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 IFT80Q9P2H3 777 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-204ENST00000424143 PSME2Q9UL46 239 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 WDR37Q9Y2I8 494 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 GIT1Q9Y2X7 761 aa15.16■□□□□ 0.02
C9orf3-204ENST00000424143 LCHNA4D1U4 455 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 E9PAM4 449 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 INPP4BO15327 924 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 LDB2O43679 373 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 ABCB7O75027 752 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 DEAF1O75398 565 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-204ENST00000424143 SULT1C4O75897 302 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 CYBBP04839 570 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 THP07101 528 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 MMP2P08253 660 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 ODC1P11926 461 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 HGFP14210 728 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 ZNF37AP17032 561 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-204ENST00000424143 HLA-DPA1P20036 260 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 GSTM2P28161 218 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 OXTRP30559 389 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 ZFP36L2P47974 494 aaKnown RBP15.15■□□□□ 0.02
C9orf3-204ENST00000424143 ALDH3A2P51648 485 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 RELAQ04206 551 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 CBX3Q13185 183 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 NFYCQ13952 458 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 MFSD10Q14728 455 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 SKIV2LQ15477 1246 aaKnown RBP15.15■□□□□ 0.02
C9orf3-204ENST00000424143 TGFBIQ15582 683 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 TYSND1Q2T9J0 566 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 GPR107Q5VW38 600 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 ANKS6Q68DC2 871 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 MSANTD2Q6P1R3 559 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 HDAC2Q92769 488 aaKnown RBP15.15■□□□□ 0.02
C9orf3-204ENST00000424143 TUBGCP3Q96CW5 907 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms