RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ACTL9Q8TC94 416 aa17.74■□□□□ 0.43
SBDSP1-202ENST00000423945 CCDC3Q9BQI4 270 aa17.74■□□□□ 0.43
SBDSP1-202ENST00000423945 GORASP1Q9BQQ3 440 aa17.74■□□□□ 0.43
SBDSP1-202ENST00000423945 NRSN2Q9GZP1 204 aa17.74■□□□□ 0.43
SBDSP1-202ENST00000423945 SPATS2LQ9NUQ6 558 aaKnown RBP17.74■□□□□ 0.43
SBDSP1-202ENST00000423945 PACSIN2Q9UNF0 486 aaPredicted RBP17.74■□□□□ 0.43
SBDSP1-202ENST00000423945 SHOC2Q9UQ13 582 aa17.74■□□□□ 0.43
SBDSP1-202ENST00000423945 OAS3Q9Y6K5 1087 aaKnown RBP17.74■□□□□ 0.43
SBDSP1-202ENST00000423945 LOC285095A0A1B0GVY8 99 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 A0A1W2PNU3 283 aaPredicted RBP17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 INPP4BO15327 924 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 DDX3YO15523 660 aaKnown RBP17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 MTSS1O43312 755 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 NDST3O95803 873 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 AK4P27144 223 aaPredicted RBP17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 GNPDA1P46926 289 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 PDX1P52945 283 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 RWDD2BP57060 319 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 OTUD4Q01804 1114 aaKnown RBP17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 XRCC4Q13426 336 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 TMC3Q7Z5M5 1100 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 GPR26Q8NDV2 337 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 FAM46DQ8NEK8 389 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 SCG3Q8WXD2 468 aaKnown RBP17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 NAT6Q93015 286 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 CCDC74AQ96AQ1 378 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 NXPE2Q96DL1 559 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 HIC2Q96JB3 615 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 MRGPRX2Q96LB1 330 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 FCRL5Q96RD9 977 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 FAM118BQ9BPY3 351 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 ABCG4Q9H172 646 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 FAM83DQ9H4H8 585 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 ZFYVE1Q9HBF4 777 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 MAGEE1Q9HCI5 957 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 TRNAU1APQ9NX07 287 aaKnown RBP17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 KLHL8Q9P2G9 620 aaPredicted RBP17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 FAM153AQ9UHL3 310 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 RAXQ9Y2V3 346 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 ZNF711Q9Y462 761 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 CAPN6Q9Y6Q1 641 aa17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 URB1O60287 2271 aaKnown RBP17.73■□□□□ 0.43
SBDSP1-202ENST00000423945 RGSL1A5PLK6 1076 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 NTN3O00634 580 aaPredicted RBP17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 AURKAO14965 403 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 DNAJC6O75061 913 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 CSO75390 466 aaKnown RBP17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 ATP1A1P05023 1023 aaKnown RBP17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 ADCY8P40145 1251 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 CHRNA4P43681 627 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 WNT3AP56704 352 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 CTBSQ01459 385 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 KIF5AQ12840 1032 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 HLTFQ14527 1009 aaKnown RBP eCLIP17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 PYCR3Q53H96 274 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 PID1Q7Z2X4 250 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 C17orf82Q86X59 251 aaPredicted RBP17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 DEPDC7Q96QD5 511 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 VAT1Q99536 393 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 PKD2L2Q9NZM6 624 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 AMFRQ9UKV5 643 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 UNC13CQ8NB66 2214 aa17.72■□□□□ 0.43
SBDSP1-202ENST00000423945 A0A1W2PQM1 296 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 B4DGG1 531 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 H7C0C1 242 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 TLX3O43711 291 aaPredicted RBP17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 FTCDO95954 541 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 FGF1P05230 155 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 PYGLP06737 847 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 ATP5OP48047 213 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 ISXQ2M1V0 245 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 C14orf28Q4W4Y0 310 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 MARK2Q7KZI7 788 aaKnown RBP17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 CCHCR1Q8TD31 782 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 TAAR2Q9P1P5 351 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 NFKBIL1Q9UBC1 381 aaPredicted RBP17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 ENTPD2Q9Y5L3 495 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 ADGRG1Q9Y653 693 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 ITPR1Q14643 2758 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 BPTFQ12830 3046 aa17.71■□□□□ 0.43
SBDSP1-202ENST00000423945 MAZP56270 477 aaKnown RBP17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 DCDC1P59894 354 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 CCL7P80098 99 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 ILF3Q12906 894 aaKnown RBP eCLIP17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 SIRPB2Q5JXA9 342 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 CERCAMQ5T4B2 595 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 PEX26Q7Z412 305 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 TTC30BQ8N4P2 665 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 PATE1Q8WXA2 126 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 OR2M4Q96R27 311 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 GSDMCQ9BYG8 508 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 DPEP2Q9H4A9 486 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 TRHDEQ9UKU6 1024 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 AK5Q9Y6K8 562 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 RNF215Q9Y6U7 377 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 ADAMTS20P59510 1910 aa17.7■□□□□ 0.42
SBDSP1-202ENST00000423945 PMS2P1A4D2B8 440 aa17.69■□□□□ 0.42
SBDSP1-202ENST00000423945 BRINP1O60477 761 aa17.69■□□□□ 0.42
SBDSP1-202ENST00000423945 USP12O75317 370 aa17.69■□□□□ 0.42
SBDSP1-202ENST00000423945 TCEA3O75764 348 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms