RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 NFATC4Q14934 902 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 TRIP13Q15645 432 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-214ENST00000423251 PRAMEF14Q5SWL7 426 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 HENMT1Q5T8I9 393 aaKnown RBP18.65■□□□□ 0.58
MCF2L-214ENST00000423251 RAET1GQ6H3X3 334 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 ADAMTSL4Q6UY14 1074 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 MACC1Q6ZN28 852 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 GPR26Q8NDV2 337 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 DTX3LQ8TDB6 740 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 FUBP1Q96AE4 644 aaKnown RBP18.65■□□□□ 0.58
MCF2L-214ENST00000423251 WDR26Q9H7D7 661 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 PHPT1Q9NRX4 125 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-214ENST00000423251 TM7SF3Q9NS93 570 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.65■□□□□ 0.58
MCF2L-214ENST00000423251 FNDC3AQ9Y2H6 1198 aaKnown RBP18.65■□□□□ 0.58
MCF2L-214ENST00000423251 PKP3Q9Y446 797 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 PCDHGB2Q9Y5G2 931 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 FAM208BQ5VWN6 2430 aa18.65■□□□□ 0.58
MCF2L-214ENST00000423251 PCDHGA12O60330 932 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 SOD1P00441 154 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 LPOP22079 712 aaPredicted RBP18.64■□□□□ 0.57
MCF2L-214ENST00000423251 KELP23276 732 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 MAGEA6P43360 314 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 CCT8P50990 548 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 CDH17Q12864 832 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 TPRG1LQ5T0D9 272 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 PPP1R21Q6ZMI0 780 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 DBX2Q6ZNG2 339 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 SYDE1Q6ZW31 735 aaPredicted RBP18.64■□□□□ 0.57
MCF2L-214ENST00000423251 PARGQ86W56 976 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 OR52K1Q8NGK4 314 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 ZCCHC14Q8WYQ9 949 aaKnown RBP18.64■□□□□ 0.57
MCF2L-214ENST00000423251 PLEKHG4BQ96PX9 1271 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 CASS4Q9NQ75 786 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 NEUROG3Q9Y4Z2 214 aa18.64■□□□□ 0.57
MCF2L-214ENST00000423251 SPEGQ15772 3267 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 TMEM8BA6NDV4 472 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 AP3B1O00203 1094 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 TNFRSF10CO14798 259 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 STX7O15400 261 aaKnown RBP18.63■□□□□ 0.57
MCF2L-214ENST00000423251 SLC4A1P02730 911 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 CSF2P04141 144 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 MYCLP1P12525 358 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-214ENST00000423251 CD59P13987 128 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 TPH1P17752 444 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 TPSB2P20231 275 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 PTGIRP43119 386 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 VPS41P49754 854 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 CDK3Q00526 305 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 EIF2B5Q13144 721 aaKnown RBP18.63■□□□□ 0.57
MCF2L-214ENST00000423251 SUZ12Q15022 739 aaKnown RBP18.63■□□□□ 0.57
MCF2L-214ENST00000423251 PPP1R7Q15435 360 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 SHBQ15464 509 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 TPSAB1Q15661 275 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 PDPK2PQ6A1A2 396 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 ENPP7Q6UWV6 458 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 HEATR4Q86WZ0 1026 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 KLHL7Q8IXQ5 586 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 TRAM1L1Q8N609 369 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 DNAAF3Q8N9W5 541 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 HIC2Q96JB3 615 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 WDR92Q96MX6 357 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 CAMK1GQ96NX5 476 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 AGAP2Q99490 1192 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 ZSCAN5AQ9BUG6 496 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 LGR4Q9BXB1 951 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 BPIFA1Q9NP55 256 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 ARL5AQ9Y689 179 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 ZZEF1O43149 2961 aa18.63■□□□□ 0.57
MCF2L-214ENST00000423251 LDB2O43679 373 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 GRIA1P42261 906 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 LAMB3Q13751 1172 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 SPATA4Q8NEY3 305 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 OR56A4Q8NGH8 313 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 BTN2A2Q8WVV5 523 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 SPATA16Q9BXB7 569 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 IL26Q9NPH9 171 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 DNAJC28Q9NX36 388 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 CDC23Q9UJX2 597 aa18.62■□□□□ 0.57
MCF2L-214ENST00000423251 CNOT6Q9ULM6 557 aaKnown RBP18.62■□□□□ 0.57
MCF2L-214ENST00000423251 SH3BP5O60239 455 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 URI1O94763 535 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-214ENST00000423251 NME1P15531 152 aaKnown RBP18.61■□□□□ 0.57
MCF2L-214ENST00000423251 SPAM1P38567 509 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 BLKP51451 505 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 HNRNPKP61978 463 aaKnown RBP eCLIP18.61■□□□□ 0.572e-6■■■□□ 19.1
MCF2L-214ENST00000423251 SARNPP82979 210 aaKnown RBP18.61■□□□□ 0.57
MCF2L-214ENST00000423251 PPARDQ03181 441 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 PTK6Q13882 451 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 TUBB2AQ13885 445 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 KCNJ11Q14654 390 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 ZNF542PQ5EBM4 170 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 ALS2CLQ60I27 953 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 CHCHD4Q8N4Q1 142 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 OR4K2Q8NGD2 314 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 SAP25Q8TEE9 199 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 ZNF592Q92610 1267 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 COX14Q96I36 57 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 TBATAQ96M53 351 aa18.61■□□□□ 0.57
MCF2L-214ENST00000423251 TUBB2BQ9BVA1 445 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms