RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 DPH1Q9BZG8 443 aa9.24□□□□□ -0.93
NUP50-206ENST00000422489 CPNE5Q9HCH3 593 aa9.24□□□□□ -0.93
NUP50-206ENST00000422489 UBP1Q9NZI7 540 aa9.24□□□□□ -0.93
NUP50-206ENST00000422489 PKD2L2Q9NZM6 624 aa9.24□□□□□ -0.93
NUP50-206ENST00000422489 SAE1Q9UBE0 346 aaPredicted RBP9.24□□□□□ -0.93
NUP50-206ENST00000422489 PISDQ9UG56 409 aa9.24□□□□□ -0.93
NUP50-206ENST00000422489 RPL26L1Q9UNX3 145 aaKnown RBP9.24□□□□□ -0.93
NUP50-206ENST00000422489 SLC17A4Q9Y2C5 497 aa9.24□□□□□ -0.93
NUP50-206ENST00000422489 PRKAB1Q9Y478 270 aa9.24□□□□□ -0.93
NUP50-206ENST00000422489 LOXL2Q9Y4K0 774 aa9.24□□□□□ -0.93
NUP50-206ENST00000422489 ALG6Q9Y672 507 aa9.24□□□□□ -0.93
NUP50-206ENST00000422489 D6RAR5 112 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 PLD2O14939 933 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 CST8O60676 142 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 SNX2O60749 519 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 PMPCBO75439 489 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 SOD1P00441 154 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 SPINT3P49223 89 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 PDX1P52945 283 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 NAP1L1P55209 391 aaKnown RBP9.23□□□□□ -0.93
NUP50-206ENST00000422489 TMPRSS3P57727 454 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 IFI35P80217 286 aaPredicted RBP9.23□□□□□ -0.93
NUP50-206ENST00000422489 CDK18Q07002 472 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 TFDP2Q14188 446 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 SPA17Q15506 151 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 MAP9Q49MG5 647 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 PYCR3Q53H96 274 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 LRRC38Q5VT99 294 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 NKAIN2Q5VXU1 208 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 ALS2CLQ60I27 953 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 ALG1LQ6GMV1 187 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 BZW1Q7L1Q6 419 aaKnown RBP9.23□□□□□ -0.93
NUP50-206ENST00000422489 ZNF765Q7L2R6 523 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 SPRED1Q7Z699 444 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 PIM3Q86V86 326 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 SPATA22Q8NHS9 363 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 LIN37Q96GY3 246 aaPredicted RBP9.23□□□□□ -0.93
NUP50-206ENST00000422489 UBL7Q96S82 380 aaPredicted RBP9.23□□□□□ -0.93
NUP50-206ENST00000422489 SPATA16Q9BXB7 569 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 GPR63Q9BZJ6 419 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 CDH19Q9H159 772 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 SLC25A51Q9H1U9 297 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 SEMA6CQ9H3T2 930 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 ZFYVE1Q9HBF4 777 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 RDH14Q9HBH5 336 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 GLOD4Q9HC38 313 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 AKAP7Q9P0M2 348 aaPredicted RBP9.23□□□□□ -0.93
NUP50-206ENST00000422489 INTUQ9ULD6 942 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 TFR2Q9UP52 801 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 SHOC2Q9UQ13 582 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 PCDHA13Q9Y5I0 950 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 ST14Q9Y5Y6 855 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 ZFHX4Q86UP3 3567 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 ZZEF1O43149 2961 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 CHD5Q8TDI0 1954 aa9.23□□□□□ -0.93
NUP50-206ENST00000422489 PKD1L2Q7Z442 2459 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 RGSL1A5PLK6 1076 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 ZNF487B1APH4 448 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 F5H423 210 aaPredicted RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 PPM1DO15297 605 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 ZRANB2O95218 330 aaKnown RBP eCLIP9.22□□□□□ -0.93
NUP50-206ENST00000422489 MT-CYBP00156 380 aaPredicted RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 MPSTP25325 297 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 SLC5A2P31639 672 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 UCNP55089 124 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 EIF3IQ13347 325 aaKnown RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 TCEAL1Q15170 157 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 TEX44Q53QW1 395 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 ZNF648Q5T619 568 aaPredicted RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 CCDC181Q5TID7 509 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 IGF2-ASQ6U949 168 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 SPOCD1Q6ZMY3 1216 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 PID1Q7Z2X4 250 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 LYSMD3Q7Z3D4 306 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 C17orf82Q86X59 251 aaPredicted RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 VSIG1Q86XK7 387 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 CCDC50Q8IVM0 306 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 NAGSQ8N159 534 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 TC2NQ8N9U0 490 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 TFB1MQ8WVM0 346 aaKnown RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 P3H4Q92791 437 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 USP7Q93009 1102 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 HAUS1Q96CS2 278 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 IMP4Q96G21 291 aaKnown RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 SCARF2Q96GP6 870 aaPredicted RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 AHCYL2Q96HN2 611 aaKnown RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 COX14Q96I36 57 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 WDR24Q96S15 920 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 LYSMD1Q96S90 227 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 CMKLR1Q99788 373 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 HEMGNQ9BXL5 484 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 ZMYND15Q9H091 742 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 BRD8Q9H0E9 1235 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 GOLPH3Q9H4A6 298 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 ARFGAP3Q9NP61 516 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 KCNK4Q9NYG8 393 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 CNOT6Q9ULM6 557 aaKnown RBP9.22□□□□□ -0.93
NUP50-206ENST00000422489 KCNK6Q9Y257 313 aa9.22□□□□□ -0.93
NUP50-206ENST00000422489 ASPMQ8IZT6 3477 aa9.21□□□□□ -0.93
NUP50-206ENST00000422489 TP53BP1Q12888 1972 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms