RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 TBATAQ96M53 351 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 C19orf43Q9BQ61 176 aa22.97■■□□□ 1.27
SMARCB1-205ENST00000417137 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 SDC3O75056 442 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 ECEL1O95672 775 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 SOD1P00441 154 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 TUBB4AP04350 444 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 HK3P52790 923 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 CDK16Q00536 496 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 GPS1Q13098 491 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 MSLNQ13421 630 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 LAMB3Q13751 1172 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 TRIP13Q15645 432 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 ALS2CLQ60I27 953 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 NYAP1Q6ZVC0 841 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 RD3Q7Z3Z2 195 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 DTX3LQ8TDB6 740 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 TSACCQ96A04 125 aaPredicted RBP22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 AGAP2Q99490 1192 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 APOBEC3BQ9UH17 382 aaKnown RBP22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 MOSPD1Q9UJG1 213 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 ARL5AQ9Y689 179 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 CSNK1G3Q9Y6M4 447 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 DGKBQ9Y6T7 804 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 LRRK1Q38SD2 2015 aa22.96■■□□□ 1.27
SMARCB1-205ENST00000417137 DCDC2BA2VCK2 349 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 TMEM202A6NGA9 273 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 CCDC188H7C350 402 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 CEACAM1P13688 526 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 CTSEP14091 401 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 TPH1P17752 444 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 SPAM1P38567 509 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 SARNPP82979 210 aaKnown RBP22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 ALG11Q2TAA5 492 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 KNL1Q8NG31 2342 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 OR52K1Q8NGK4 314 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 CDC6Q99741 560 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 KLF15Q9UIH9 416 aa22.95■■□□□ 1.26
SMARCB1-205ENST00000417137 FANCGO15287 622 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 INPP4BO15327 924 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 AQP9O43315 295 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 BUD23O43709 281 aaKnown RBP22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 ALPPL2P10696 532 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 HADHAP40939 763 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 VPS41P49754 854 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 PPP1R7Q15435 360 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 SDR16C5Q8N3Y7 309 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 SLC25A45Q8N413 288 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 FSTL5Q8N475 847 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 DEFB124Q8NES8 71 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 OR4K2Q8NGD2 314 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 LMX1AQ8TE12 382 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 COX14Q96I36 57 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 C16orf45Q96MC5 204 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 FRMD8Q9BZ67 464 aaPredicted RBP22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 DDX47Q9H0S4 455 aaKnown RBP22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 IL26Q9NPH9 171 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 PCYOX1Q9UHG3 505 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 APPL1Q9UKG1 709 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 PCOLCE2Q9UKZ9 415 aa22.94■■□□□ 1.26
SMARCB1-205ENST00000417137 GLYATL1P3A0A0U1RQE8 302 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 PRSS38A1L453 326 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 FADS2P1A8MWK0 482 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 SCAMP1O15126 338 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 SLC25A14O95258 325 aaPredicted RBP22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 ASMTLO95671 621 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 CEACAM5P06731 702 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 NOVA1P51513 510 aaKnown RBP22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 POU6F1Q14863 301 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 ELOCQ15369 112 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 PRRT3Q5FWE3 981 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 KANSL1Q7Z3B3 1105 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 ZNF548Q8NEK5 533 aaPredicted RBP22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 OR1E3Q8WZA6 343 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 SLCO2A1Q92959 643 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 DUSP23Q9BVJ7 150 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 CYP4F12Q9HCS2 524 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 FGF22Q9HCT0 170 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 CASS4Q9NQ75 786 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 CNOT6Q9ULM6 557 aaKnown RBP22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 SLC17A4Q9Y2C5 497 aa22.93■■□□□ 1.26
SMARCB1-205ENST00000417137 DNAH14Q0VDD8 3507 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 KIF2AO00139 706 aaPredicted RBP22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 KCNK5O95279 499 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 TPSB2P20231 275 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 ITGA9Q13797 1035 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 SEPT6Q14141 434 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 TPSAB1Q15661 275 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 DOK6Q6PKX4 331 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 SYDE1Q6ZW31 735 aaPredicted RBP22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 RBFAQ8N0V3 343 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 EID2Q8N6I1 236 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 SCG3Q8WXD2 468 aaKnown RBP22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 GLYATL1Q969I3 302 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 CAMK1GQ96NX5 476 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 PIH1D1Q9NWS0 290 aaKnown RBP22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 UCKL1Q9NWZ5 548 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 VPS18Q9P253 973 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 PNMA8BQ9ULN7 279 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms