RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TPSAB1Q15661 275 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 GLYATQ6IB77 296 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 DENND5AQ6IQ26 1287 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 CDC73Q6P1J9 531 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 TPGS1Q6ZTW0 290 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 KCTD8Q6ZWB6 473 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 PLEKHH3Q7Z736 793 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 MCFD2Q8NI22 146 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 FCRL2Q96LA5 508 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 RSPH9Q9H1X1 276 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 EURLQ9NYK6 297 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 ADAM28Q9UKQ2 775 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 OAZ3Q9UMX2 235 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 ASCC3Q8N3C0 2202 aaKnown RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 BCL9LQ86UU0 1499 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 BRWD1Q9NSI6 2320 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 LTN1O94822 1766 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 A6NHS1 94 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 BOLA2-SMG1P6H3BVE0 249 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 UBXN8O00124 270 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 VPS4BO75351 444 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 EPORP19235 508 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 NAB1Q13506 487 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 TLR1Q15399 786 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 TAB1Q15750 504 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 SLC25A52Q3SY17 297 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 SYPL2Q5VXT5 272 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 CAND1Q86VP6 1230 aaKnown RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 FAR1Q8WVX9 515 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 RHBGQ9H310 441 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 NFKBIL1Q9UBC1 381 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 GSTK1Q9Y2Q3 226 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 ARIH1Q9Y4X5 557 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 IQCMA0A1B0GVH7 501 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 NOBOXO60393 691 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 STT3AP46977 705 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 BCL2L1Q07817 233 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 ATAD3BQ5T9A4 648 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 CATSPERGQ6ZRH7 1159 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 TRAPPC5Q8IUR0 188 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 BORCS5Q969J3 196 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 C19orf60Q96EN9 201 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 SIGLEC10Q96LC7 697 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 TSSK3Q96PN8 268 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 CYP2S1Q96SQ9 504 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 PDGFDQ9GZP0 370 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-202ENST00000415950 ZFYVE1Q9HBF4 777 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 AHSPQ9NZD4 102 aa12.87□□□□□ -0.35
SCN1B-202ENST00000415950 A0A088AWK7 358 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 ANKDD1BA6NHY2 528 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 LSM1O15116 133 aaKnown RBP12.86□□□□□ -0.35
SCN1B-202ENST00000415950 LRIG2O94898 1065 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 CHRM5P08912 532 aaPredicted RBP12.86□□□□□ -0.35
SCN1B-202ENST00000415950 EFNA1P20827 205 aaPredicted RBP12.86□□□□□ -0.35
SCN1B-202ENST00000415950 ICAM3P32942 547 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 KCNJ11Q14654 390 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 NDUFA5Q16718 116 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 CCDC157Q569K6 752 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 REP15Q6BDI9 236 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 PNPT1Q8TCS8 783 aaKnown RBP12.86□□□□□ -0.35
SCN1B-202ENST00000415950 FBXL18Q96ME1 805 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 FEM1AQ9BSK4 669 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 FBXO44Q9H4M3 255 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 MARCH7Q9H992 704 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 NKIRAS2Q9NYR9 191 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 NFASCO94856 1347 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 CBFA2T3O75081 653 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 INSCQ1MX18 579 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 PYDC2Q56P42 97 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 ARMC12Q5T9G4 340 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 RNF180Q86T96 592 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 OSBPL6Q9BZF3 934 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 COQ6Q9Y2Z9 468 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 RGL2O15211 777 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 HOXC6P09630 235 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 OR56A5P0C7T3 313 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 FUT4P22083 530 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 MMP14P50281 582 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 CDC42P60953 191 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 RHAGQ02094 409 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 LIPEQ05469 1076 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 EPS8Q12929 822 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 TREML2Q5T2D2 321 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 EIF3MQ7L2H7 374 aaKnown RBP12.86□□□□□ -0.35
SCN1B-202ENST00000415950 CFAP52Q8N1V2 620 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 PHF10Q8WUB8 498 aaKnown RBP12.86□□□□□ -0.35
SCN1B-202ENST00000415950 PANX1Q96RD7 426 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 GPATCH1Q9BRR8 931 aaKnown RBP12.86□□□□□ -0.35
SCN1B-202ENST00000415950 UNC93B1Q9H1C4 597 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 ABCB9Q9NP78 766 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 KRCC1Q9NPI7 259 aaPredicted RBP12.86□□□□□ -0.35
SCN1B-202ENST00000415950 RPRD1BQ9NQG5 326 aaKnown RBP12.86□□□□□ -0.35
SCN1B-202ENST00000415950 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
SCN1B-202ENST00000415950 GCATO75600 419 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 UGT1A1P22309 533 aa12.85□□□□□ -0.35
SCN1B-202ENST00000415950 UGT1A4P22310 534 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms