RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ETV1P50549 477 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 RACK1P63244 317 aaKnown RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 TOP3AQ13472 1001 aaPredicted RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 ATAD3CQ5T2N8 411 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 PXDC1Q5TGL8 231 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 METTL2BQ6P1Q9 378 aaKnown RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 MFSD7Q6UXD7 560 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 PIWIL3Q7Z3Z3 882 aaKnown RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 REM2Q8IYK8 340 aaPredicted RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 ST13P5Q8NFI4 369 aaPredicted RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 ADAM32Q8TC27 787 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 SPATA18Q8TC71 538 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 SENP8Q96LD8 212 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 MRPL45Q9BRJ2 306 aaKnown RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 LHPPQ9H008 270 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 UNC93B1Q9H1C4 597 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 SCPEP1Q9HB40 452 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 HPS4Q9NQG7 708 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 IPPQ9Y573 584 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 MN1Q10571 1320 aaPredicted RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 CNTNAP2Q9UHC6 1331 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 SGTAO43765 313 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 UGT2B11O75310 529 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 LSM8O95777 96 aaKnown RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 GNAO1P09471 354 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 HOXC6P09630 235 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 FGF3P11487 239 aaPredicted RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 BMP4P12644 408 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 HARS2P49590 506 aaKnown RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 SEPHS1P49903 392 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 PLA2G16P53816 162 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 CCL23P55773 120 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 TAS2R40P59535 323 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 DSC3Q14574 896 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 SKIV2LQ15477 1246 aaKnown RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 LRRC38Q5VT99 294 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 PDZD4Q76G19 769 aaPredicted RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 PAGE2Q7Z2X7 111 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 PTAR1Q7Z6K3 402 aaPredicted RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 ZNF467Q7Z7K2 595 aaPredicted RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 SNX29P2Q8IUI4 249 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 UNC45BQ8IWX7 931 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 DNAAF3Q8N9W5 541 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 RHOXF1Q8NHV9 184 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 LMO3Q8TAP4 145 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 PGLYRP2Q96PD5 576 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 TM9SF2Q99805 663 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 KCTD14Q9BQ13 255 aaPredicted RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 C17orf62Q9BQA9 187 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 FUNDC2Q9BWH2 189 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 HAPLN2Q9GZV7 340 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 RSAD1Q9HA92 442 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 TRMT13Q9NUP7 481 aaKnown RBP7.82□□□□□ -1.16
SIK3-203ENST00000415541 CDYLQ9Y232 598 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 SLC45A1Q9Y2W3 748 aa7.82□□□□□ -1.16
SIK3-203ENST00000415541 IGKV6D-21A0A0A0MT36 114 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 ATP6V1G2-DDX39BF2Z307 99 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 CLDN5O00501 218 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 BET1O15155 118 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 SEPT4O43236 478 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 SEMA3DO95025 777 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 GARSP41250 739 aaKnown RBP7.81□□□□□ -1.16
SIK3-203ENST00000415541 MLLT10P55197 1068 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 IFITM3Q01628 133 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 CLVS2Q5SYC1 327 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 SEL1L3Q68CR1 1132 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 CCBE1Q6UXH8 406 aaPredicted RBP7.81□□□□□ -1.16
SIK3-203ENST00000415541 PHF10Q8WUB8 498 aaKnown RBP7.81□□□□□ -1.16
SIK3-203ENST00000415541 EDEM1Q92611 657 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 TP53INP1Q96A56 240 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 CENPNQ96H22 339 aaPredicted RBP7.81□□□□□ -1.16
SIK3-203ENST00000415541 LPIN3Q9BQK8 851 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 STRA6Q9BX79 667 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 ZNF518BQ9C0D4 1074 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 KCNN2Q9H2S1 579 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 EPS8L2Q9H6S3 715 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 NECTIN3Q9NQS3 549 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PDLIM7Q9NR12 457 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 FAM105AQ9NUU6 356 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 FLRT1Q9NZU1 646 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 AP3M1Q9Y2T2 418 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PCDHB12Q9Y5F1 795 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 RAD54BQ9Y620 910 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 RBBP6Q7Z6E9 1792 aaKnown RBP7.81□□□□□ -1.16
SIK3-203ENST00000415541 TRPC5OSA6NMA1 111 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 M0QYT0 321 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 ARHGAP33O14559 1287 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 PPEF2O14830 753 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 KCNN4O15554 427 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 TBX1O43435 398 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 EDN1P05305 212 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 SAT1P21673 171 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 ACAP2Q15057 778 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 DESI1Q6ICB0 168 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 CYP2R1Q6VVX0 501 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 TIFABQ6ZNK6 161 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 ZNF767PQ75MW2 155 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 UTS2BQ765I0 119 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 CDH24Q86UP0 819 aa7.81□□□□□ -1.16
SIK3-203ENST00000415541 OFCC1Q8IZS5 231 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms