RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 DYNC1LI2O43237 492 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 CYP7B1O75881 506 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 ANXA5P08758 320 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 ATF6P18850 670 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 GTF2A2P52657 109 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 GMFBP60983 142 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 SPIBQ01892 262 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 NXF3Q9H4D5 531 aaKnown RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 CNOT11Q9UKZ1 510 aaKnown RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 MFHAS1Q9Y4C4 1052 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 DNAJB5O75953 348 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 RSL1D1O76021 490 aaKnown RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 STAU1O95793 577 aaKnown RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 PAX3P23760 479 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 EFEMP1Q12805 493 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 CCDC36Q8IYA8 594 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 ASCC1Q8N9N2 400 aaKnown RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 SEPT5Q99719 369 aaPredicted RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 MLPHQ9BV36 600 aaPredicted RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 OSBPL10Q9BXB5 764 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 QTRT2Q9H974 415 aaKnown RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 POLR3HQ9Y535 204 aaPredicted RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 FAM92AA1XBS5 289 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 CDH1P12830 882 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 TTPAP49638 278 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 LCP2Q13094 533 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 RUNDC3AQ59EK9 446 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 SYCE2Q6PIF2 218 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 C15orf52Q6ZUT6 534 aaKnown RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 CCDC28AQ8IWP9 274 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 FEM1CQ96JP0 617 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 LRRC3Q9BY71 257 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 TLR8Q9NR97 1041 aaKnown RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 ST14Q9Y5Y6 855 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 FFAR3O14843 346 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 GPR42O15529 346 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 METTL18O95568 372 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 CD86P42081 329 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 BACE1P56817 501 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 KCNJ11Q14654 390 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 RAB39AQ14964 217 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 NPTX1Q15818 432 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 SLC25A52Q3SY17 297 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 OVOS1Q6IE37 1185 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 CDK20Q8IZL9 346 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 PIH1D2Q8WWB5 315 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 CCDC177Q9NQR7 707 aaPredicted RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 ZNF358Q9NW07 568 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 ISPDA4D126 451 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 TCF4P15884 667 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 AKAP5P24588 427 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 TUFMP49411 452 aaKnown RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 TPRG1LQ5T0D9 272 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 SLC27A1Q6PCB7 646 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 EFHD2Q96C19 240 aaPredicted RBP17.61■□□□□ 0.41
SMPD4-202ENST00000409031 ERVK-11Q9UQG0 969 aa17.61■□□□□ 0.41
SMPD4-202ENST00000409031 ZNF536O15090 1300 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 ARPC2O15144 300 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 IL1BP01584 269 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 CAPSQ13938 189 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 AP5B1Q2VPB7 878 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 IZUMO1Q8IYV9 350 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 NRG4Q8WWG1 115 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 FBXO32Q969P5 355 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 ARL15Q9NXU5 204 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 MYO5BQ9ULV0 1848 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 MAGEB3O15480 346 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 PGRP06401 933 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 C7P10643 843 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 WNT3AP56704 352 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 MTA1Q13330 715 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 ZNF404Q494X3 552 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 DALRD3Q5D0E6 543 aaKnown RBP17.6■□□□□ 0.41
SMPD4-202ENST00000409031 GLOD4Q9HC38 313 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 SLC12A8A0AV02 714 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 IRF6O14896 467 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 MFSD11O43934 449 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 RHOCP08134 193 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 CDK4P11802 303 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 OR1E1P30953 314 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 STARP49675 285 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 AFTPHQ6ULP2 937 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 CDT1Q9H211 546 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 TTYH1Q9H313 450 aaPredicted RBP17.6■□□□□ 0.41
SMPD4-202ENST00000409031 SLC9A8Q9Y2E8 581 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 MYOCOSA0A1B0GUC4 107 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 IRGMA1A4Y4 181 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 KLHL18O94889 574 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 TBX4P57082 545 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 GRIK5Q16478 980 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 ZNF517Q6ZMY9 492 aaPredicted RBP17.6■□□□□ 0.41
SMPD4-202ENST00000409031 PCDH19Q8TAB3 1148 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 SLC38A2Q96QD8 506 aa17.6■□□□□ 0.41
SMPD4-202ENST00000409031 AP2A2O94973 939 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 UGT2B15P54855 530 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 RHOAP61586 193 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 PUDPQ08623 228 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 IL18Q14116 193 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 PMF1Q6P1K2 205 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 ZC3H7AQ8IWR0 971 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms