RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CES1P23141 567 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 EEF1DP29692 281 aaKnown RBP16.77■□□□□ 0.27
NUP50-203ENST00000407019 CORO1AP31146 461 aaKnown RBP16.77■□□□□ 0.27
NUP50-203ENST00000407019 TUFMP49411 452 aaKnown RBP16.77■□□□□ 0.27
NUP50-203ENST00000407019 SGSHP51688 502 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 FOXA1P55317 472 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 CYTH1Q15438 398 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 SETMARQ53H47 684 aaPredicted RBP16.77■□□□□ 0.27
NUP50-203ENST00000407019 SAMD4BQ5PRF9 694 aaKnown RBP16.77■□□□□ 0.27
NUP50-203ENST00000407019 LAYNQ6UX15 382 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 FUNDC1Q8IVP5 155 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 DDIASQ8IXT1 998 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 RIN3Q8TB24 985 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 ATP6V1E2Q96A05 226 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 ROPN1LQ96C74 230 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 PCDHAC1Q9H158 963 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 TMEM181Q9P2C4 612 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 CD300AQ9UGN4 299 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 VPS9D1Q9Y2B5 631 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 MED16Q9Y2X0 877 aa16.77■□□□□ 0.27
NUP50-203ENST00000407019 C15orf38-AP3S2A0A0A6YYH1 394 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 A0A1B0GVM2 712 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 PRORSD1PA6NEY8 169 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 ENO4A6NNW6 628 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 CBX4O00257 560 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 AP1G1O43747 822 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 RNASEH2AO75792 299 aaKnown RBP16.76■□□□□ 0.27
NUP50-203ENST00000407019 STC2O76061 302 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 PYGLP06737 847 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 HSPA13P48723 471 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 CLCQ05315 142 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 LCP2Q13094 533 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 SLC8B1Q6J4K2 584 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 ARPINQ7Z6K5 226 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 TMEM102Q8N9M5 508 aaPredicted RBP16.76■□□□□ 0.27
NUP50-203ENST00000407019 PCYOX1LQ8NBM8 494 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 CD99L2Q8TCZ2 262 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 GPR21Q99679 349 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 PIDD1Q9HB75 910 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 RAI2Q9Y5P3 530 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 PTGDR2Q9Y5Y4 395 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 OAS3Q9Y6K5 1087 aaKnown RBP16.76■□□□□ 0.27
NUP50-203ENST00000407019 A0A0J9YYE9 177 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 SYCE1LA8MT33 242 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 NR5A2O00482 541 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 DNAJA2O60884 412 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 ECI2O75521 394 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 KLKB1P03952 638 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 LPOP22079 712 aaPredicted RBP16.76■□□□□ 0.27
NUP50-203ENST00000407019 RHDQ02161 417 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 TSNQ15631 228 aaKnown RBP16.76■□□□□ 0.27
NUP50-203ENST00000407019 PTPRNQ16849 979 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 IL23RQ5VWK5 629 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 ANKS6Q68DC2 871 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 PHYKPLQ8IUZ5 450 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 MFN1Q8IWA4 741 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 MIER2Q8N344 545 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 NKAPQ8N5F7 415 aaKnown RBP16.76■□□□□ 0.27
NUP50-203ENST00000407019 KCNA7Q96RP8 456 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 CWH43Q9H720 699 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 MTRRQ9UBK8 725 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 IKZF3Q9UKT9 509 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 PHF24Q9UPV7 400 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 AP4S1Q9Y587 144 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 AP4B1Q9Y6B7 739 aa16.76■□□□□ 0.27
NUP50-203ENST00000407019 PFDN6O15212 129 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 INHAP05111 366 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 LBPP18428 481 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 RPL17P18621 184 aaKnown RBP16.75■□□□□ 0.27
NUP50-203ENST00000407019 OR1D2P34982 312 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 GRB7Q14451 532 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 TCTN1Q2MV58 587 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 MAP7D1Q3KQU3 841 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 LIN52Q52LA3 116 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 LRRC43Q8N309 656 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 PXYLP1Q8TE99 480 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 TUBGCP3Q96CW5 907 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 SMIM14Q96QK8 99 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 ZBED2Q9BTP6 218 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 ADGRE3Q9BY15 652 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 TUBB1Q9H4B7 451 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 GIMAP2Q9UG22 337 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 FKBPLQ9UIM3 349 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 PCDHGC4Q9Y5F7 938 aa16.75■□□□□ 0.27
NUP50-203ENST00000407019 NPEPPSL1A6NEC2 478 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 TSPAN3O60637 253 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 VPS26AO75436 327 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 CRCPO75575 148 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 F11P03951 625 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 RPS17P08708 135 aaKnown RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 IRF1P10914 325 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 PKMP14618 531 aaKnown RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 MC4RP32245 332 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 CDKN1CP49918 316 aaPredicted RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 SLC7A2P52569 658 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 IRX1P78414 480 aaPredicted RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 RNF219Q5W0B1 726 aaPredicted RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 C16orf59Q7L2K0 433 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 CRIPAKQ8N1N5 446 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 FUBP1Q96AE4 644 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms