RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 ACADVLP49748 655 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 CLCN4P51793 760 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 PLK1P53350 603 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 RHOAP61586 193 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 SMAD3P84022 425 aaKnown RBP9.27□□□□□ -0.93
CBX1-203ENST00000402583 PEX6Q13608 980 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 FLOT2Q14254 428 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 PTK2BQ14289 1009 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 SEMA3AQ14563 771 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 GEN1Q17RS7 908 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 ZNF423Q2M1K9 1284 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 AGKQ53H12 422 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 PIGGQ5H8A4 983 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 TCHHL1Q5QJ38 904 aaPredicted RBP9.27□□□□□ -0.93
CBX1-203ENST00000402583 PPM1LQ5SGD2 360 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 TMEM198Q66K66 360 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 ANKS6Q68DC2 871 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 ANO7Q6IWH7 933 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 CXorf57Q6NSI4 855 aaKnown RBP9.27□□□□□ -0.93
CBX1-203ENST00000402583 RETSATQ6NUM9 610 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 NCEH1Q6PIU2 408 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 TMEM207Q6UWW9 146 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 HACD2Q6Y1H2 254 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 CERS6Q6ZMG9 384 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 SLC39A5Q6ZMH5 540 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 C16orf59Q7L2K0 433 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 PIM3Q86V86 326 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 KBTBD6Q86V97 674 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 GPR65Q8IYL9 337 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 SLC39A11Q8N1S5 342 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 FBXO39Q8N4B4 442 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 PCYOX1LQ8NBM8 494 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 MICAL1Q8TDZ2 1067 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 ZNF296Q8WUU4 475 aaPredicted RBP9.27□□□□□ -0.93
CBX1-203ENST00000402583 PYDC1Q8WXC3 89 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 EXT2Q93063 718 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 PTERQ96BW5 349 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 C19orf60Q96EN9 201 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 TMA16Q96EY4 203 aaKnown RBP9.27□□□□□ -0.93
CBX1-203ENST00000402583 DEFB118Q96PH6 123 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 ATOH8Q96SQ7 321 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 CCT7Q99832 543 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 C19orf43Q9BQ61 176 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 MID1IP1Q9NPA3 183 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 PAK6Q9NQU5 681 aaPredicted RBP9.27□□□□□ -0.93
CBX1-203ENST00000402583 GKN1Q9NS71 199 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 SPATS2LQ9NUQ6 558 aaKnown RBP9.27□□□□□ -0.93
CBX1-203ENST00000402583 ZDHHC7Q9NXF8 308 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 SPG21Q9NZD8 308 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 OGDHLQ9ULD0 1010 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 PSMD13Q9UNM6 376 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 ASB3Q9Y575 518 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 TRIM17Q9Y577 477 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 PCDHB1Q9Y5F3 818 aa9.27□□□□□ -0.93
CBX1-203ENST00000402583 OAS3Q9Y6K5 1087 aaKnown RBP9.27□□□□□ -0.93
CBX1-203ENST00000402583 SHROOM3Q8TF72 1996 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 ABHD14A-ACY1A0A1B0GW23 586 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 E5RI56 91 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 UBXN8O00124 270 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 CASQ2O14958 399 aaPredicted RBP9.26□□□□□ -0.93
CBX1-203ENST00000402583 AZIN1O14977 448 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 SNX2O60749 519 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 EFCAB14O75071 495 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 BCAS2O75934 225 aaPredicted RBP9.26□□□□□ -0.93
CBX1-203ENST00000402583 SMNDC1O75940 238 aaKnown RBP eCLIP9.26□□□□□ -0.93
CBX1-203ENST00000402583 MLYCDO95822 493 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 PRLP01236 227 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 ESR1P03372 595 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 F11P03951 625 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 PDHA1P08559 390 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 PPM1AP35813 382 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 ABL2P42684 1182 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 RGRP47804 291 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 PSMD8P48556 350 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 ADARP55265 1226 aaKnown RBP9.26□□□□□ -0.93
CBX1-203ENST00000402583 IL2P60568 153 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 PSME3P61289 254 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 ARF5P84085 180 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 CACNG1Q06432 222 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 TWF1Q12792 350 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 LCP2Q13094 533 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 CDH18Q13634 790 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 PTPRCAPQ14761 206 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 SKIV2LQ15477 1246 aaKnown RBP9.26□□□□□ -0.93
CBX1-203ENST00000402583 OR4D1Q15615 310 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 PTPRNQ16849 979 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 PFKFB4Q16877 469 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 ZRANB3Q5FWF4 1079 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 RARS2Q5T160 578 aaKnown RBP9.26□□□□□ -0.93
CBX1-203ENST00000402583 ARMC12Q5T9G4 340 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 LYPLAL1Q5VWZ2 237 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 KANK2Q63ZY3 851 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 CAPRIN2Q6IMN6 1127 aaKnown RBP9.26□□□□□ -0.93
CBX1-203ENST00000402583 PRMT9Q6P2P2 845 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 TMEM154Q6P9G4 183 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.26□□□□□ -0.93
CBX1-203ENST00000402583 LARP4Q71RC2 724 aaKnown RBP eCLIP9.26□□□□□ -0.93
CBX1-203ENST00000402583 SPATA19Q7Z5L4 167 aa9.26□□□□□ -0.93
CBX1-203ENST00000402583 DNAJB7Q7Z6W7 309 aaPredicted RBP9.26□□□□□ -0.93
CBX1-203ENST00000402583 DDX53Q86TM3 631 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms