RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 ADAMTS14Q8WXS8 1223 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 SCARF2Q96GP6 870 aaPredicted RBP19.09■□□□□ 0.65
RTN4-207ENST00000402434 PBKQ96KB5 322 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 IL17CQ9P0M4 197 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 PCDHGA1Q9Y5H4 931 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 KNTC1P50748 2209 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 USP27XA6NNY8 438 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 FADS2P1A8MWK0 482 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 CTSEP14091 401 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 ACADVLP49748 655 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 SHC2P98077 582 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 CCDC173Q0VFZ6 552 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 DNAJC3Q13217 504 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 OLIG2Q13516 323 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 SNX1Q13596 522 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 LONRF2Q1L5Z9 754 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 ZCCHC8Q6NZY4 707 aaKnown RBP19.09■□□□□ 0.65
RTN4-207ENST00000402434 RAB44Q7Z6P3 723 aaPredicted RBP19.09■□□□□ 0.65
RTN4-207ENST00000402434 PNPLA1Q8N8W4 532 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 DTX3LQ8TDB6 740 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 BLOC1S5Q8TDH9 187 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 APOLD1Q96LR9 279 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 PLEKHG4BQ96PX9 1271 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 APOL2Q9BQE5 337 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 ZSCAN5AQ9BUG6 496 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 CYP4F12Q9HCS2 524 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 HOMER3Q9NSC5 361 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 TTC7AQ9ULT0 858 aaPredicted RBP19.09■□□□□ 0.65
RTN4-207ENST00000402434 PYCARDQ9ULZ3 195 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 SPEGQ15772 3267 aa19.08■□□□□ 0.65
RTN4-207ENST00000402434 LY6G6EA0A0G2JKS1 128 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 PPFIA2O75334 1257 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 SLC4A1P02730 911 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 ATP1A1P05023 1023 aaKnown RBP19.08■□□□□ 0.64
RTN4-207ENST00000402434 IVLP07476 585 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 ANXA6P08133 673 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 CELA2BP08218 269 aaPredicted RBP19.08■□□□□ 0.64
RTN4-207ENST00000402434 CKMT1AP12532 417 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 ACP1P24666 158 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 DEFB133Q30KQ1 61 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 PDPK2PQ6A1A2 396 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 GLT6D1Q7Z4J2 308 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 TRAM1L1Q8N609 369 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 TBL1YQ9BQ87 522 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 BOCQ9BWV1 1114 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 TMEM168Q9H0V1 697 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 LRRC40Q9H9A6 602 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 TRNAU1APQ9NX07 287 aaKnown RBP19.08■□□□□ 0.64
RTN4-207ENST00000402434 FEZ2Q9UHY8 353 aaPredicted RBP19.08■□□□□ 0.64
RTN4-207ENST00000402434 U3KQA8 63 aa19.08■□□□□ 0.64
RTN4-207ENST00000402434 INPP4BO15327 924 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 PSMD3O43242 534 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 USP12O75317 370 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 AP2A1O95782 977 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 IFNB1P01574 187 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 POLD2P49005 469 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 FOXC1Q12948 553 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 TAF1AQ15573 450 aaPredicted RBP19.07■□□□□ 0.64
RTN4-207ENST00000402434 ZDHHC20Q5W0Z9 365 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 TRIM74Q86UV6 250 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 PDCD7Q8N8D1 485 aaKnown RBP19.07■□□□□ 0.64
RTN4-207ENST00000402434 PRELID2Q8N945 189 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 BRSK1Q8TDC3 778 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 PTCD2Q8WV60 388 aaKnown RBP19.07■□□□□ 0.64
RTN4-207ENST00000402434 LRRC45Q96CN5 670 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 SPATA16Q9BXB7 569 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 CARS2Q9HA77 564 aaKnown RBP19.07■□□□□ 0.64
RTN4-207ENST00000402434 IL26Q9NPH9 171 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.07■□□□□ 0.642e-8■■■■■ 32
RTN4-207ENST00000402434 NCKIPSDQ9NZQ3 722 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 VPS18Q9P253 973 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 SUFUQ9UMX1 484 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 TMEM98Q9Y2Y6 226 aa19.07■□□□□ 0.64
RTN4-207ENST00000402434 SCN8AQ9UQD0 1980 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 ERI2A8K979 691 aaKnown RBP19.06■□□□□ 0.64
RTN4-207ENST00000402434 CDK4P11802 303 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 ACTN2P35609 894 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 ILKQ13418 452 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 SPARCL1Q14515 664 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 C6orf132Q5T0Z8 1188 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 ALS2CLQ60I27 953 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 GKN2Q86XP6 184 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 CHCHD4Q8N4Q1 142 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 CCDC89Q8N998 374 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 GLIS1Q8NBF1 620 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 SCG3Q8WXD2 468 aaKnown RBP19.06■□□□□ 0.64
RTN4-207ENST00000402434 OSBPL9Q96SU4 736 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 C19orf43Q9BQ61 176 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 BPIFA1Q9NP55 256 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 MOSPD1Q9UJG1 213 aa19.06■□□□□ 0.64
RTN4-207ENST00000402434 OAS3Q9Y6K5 1087 aaKnown RBP19.06■□□□□ 0.64
RTN4-207ENST00000402434 TOP3BO95985 862 aaKnown RBP19.05■□□□□ 0.64
RTN4-207ENST00000402434 FDFT1P37268 417 aa19.05■□□□□ 0.64
RTN4-207ENST00000402434 GPBAR1Q8TDU6 330 aa19.05■□□□□ 0.64
RTN4-207ENST00000402434 GLYATL1Q969I3 302 aa19.05■□□□□ 0.64
RTN4-207ENST00000402434 MS4A14Q96JA4 679 aa19.05■□□□□ 0.64
RTN4-207ENST00000402434 ETNK1Q9HBU6 452 aa19.05■□□□□ 0.64
RTN4-207ENST00000402434 ANGPTL2Q9UKU9 493 aa19.05■□□□□ 0.64
RTN4-207ENST00000402434 SNX12Q9UMY4 172 aa19.05■□□□□ 0.64
RTN4-207ENST00000402434 PKP3Q9Y446 797 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms