RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TCAF2A6NFQ2 919 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 ARVCFO00192 962 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 IL6P05231 212 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 SQLEQ14534 574 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 SETD9Q8NE22 299 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 STXBP5LQ9Y2K9 1186 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 SLC20A2Q08357 652 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 ITCHQ96J02 903 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 NAE1Q13564 534 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 DLG2Q15700 870 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 EXOC3L1Q86VI1 746 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 BPIFB6Q8NFQ5 453 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 TSSK3Q96PN8 268 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 RHBDL2Q9NX52 303 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 IKZF3Q9UKT9 509 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 MRPS7Q9Y2R9 242 aaKnown RBP11.32□□□□□ -0.6
TTC28-201ENST00000397906 LTN1O94822 1766 aa11.32□□□□□ -0.6
TTC28-201ENST00000397906 IL12BP29460 328 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 CSKP41240 450 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 SLC25A3Q00325 362 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 CACNG1Q06432 222 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 FSTL1Q12841 308 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 SUZ12Q15022 739 aaKnown RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 CREG2Q8IUH2 290 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 MMAAQ8IVH4 418 aaKnown RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 LEMD2Q8NC56 503 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 A8MU76 341 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 KCNU1A8MYU2 1149 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 RPL3P39023 403 aaKnown RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 HSPB3Q12988 150 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 SPESP1Q6UW49 350 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 HEXDCQ8WVB3 486 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 SLC9A7Q96T83 725 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 COQ7Q99807 217 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 SH3GL3Q99963 347 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 KCNS3Q9BQ31 491 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 HEPHQ9BQS7 1158 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 COPS7AQ9UBW8 275 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 MGRN1O60291 552 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 GIMD1P0DJR0 217 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 LIPMQ5VYY2 423 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 KLHL17Q6TDP4 642 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 UBR7Q8N806 425 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 SLC43A3Q8NBI5 491 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 PLD4Q96BZ4 506 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 EBNA1BP2Q99848 306 aaKnown RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 VWA7Q9Y334 891 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 TPRKBQ9Y3C4 175 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 NCANO14594 1321 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 FKBP6O75344 327 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 TRBC1P01850 177 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 AIF1P55008 147 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 TEX47Q8TBZ9 253 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 SNRPB2P08579 225 aaKnown RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 SEMA3GQ9NS98 782 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 IDH3BO43837 385 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 TM7SF2O76062 418 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 H2AFXP16104 143 aaPredicted RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 ZNF8P17098 575 aaPredicted RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 GRM2Q14416 872 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 LCLAT1Q6UWP7 414 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 ENPP7Q6UWV6 458 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 KIAA0408Q6ZU52 694 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 PIWIL2Q8TC59 973 aaKnown RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 PSMG2Q969U7 264 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 C3orf14Q9HBI5 128 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 L1RE1Q9UN81 338 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 IFT172Q9UG01 1749 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 IRS2Q9Y4H2 1338 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 CICQ96RK0 1608 aaPredicted RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 FAM155BO75949 473 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 CST1P01037 141 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 NFATC2Q13469 925 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 MEA1Q16626 185 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 PLEKHG4Q58EX7 1191 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 UBXN11Q5T124 520 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 ADGRG6Q86SQ4 1221 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 KREMEN1Q96MU8 473 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 TBC1D30Q9Y2I9 924 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 CENPXA8MT69 81 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 NRP1O14786 923 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 POP4O95707 220 aaKnown RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 SAGP10523 405 aaPredicted RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 DAW1Q8N136 415 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 APOLD1Q96LR9 279 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 KCNN2Q9H2S1 579 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 HBS1LQ9Y450 684 aaKnown RBP11.31□□□□□ -0.6
TTC28-201ENST00000397906 TCRBV9S1A1TA0A576 114 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 SIN3BO75182 1162 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 PRKCIP41743 596 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 TRIM40Q6P9F5 258 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 TMEM220Q6QAJ8 160 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 NEK6Q9HC98 313 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 MAP4K5Q9Y4K4 846 aa11.31□□□□□ -0.6
TTC28-201ENST00000397906 C22orf31O95567 290 aa11.3□□□□□ -0.6
TTC28-201ENST00000397906 C4BPAP04003 597 aaKnown RBP11.3□□□□□ -0.6
TTC28-201ENST00000397906 TRAF3Q13114 568 aa11.3□□□□□ -0.6
TTC28-201ENST00000397906 ANXA8L1Q5VT79 327 aa11.3□□□□□ -0.6
TTC28-201ENST00000397906 ADAMTS15Q8TE58 950 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms