RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CASP8AP2Q9UKL3 1982 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 A0A0U1RQS6 177 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 A0A1B0GTL3 188 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PRORSD1PA6NEY8 169 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TBC1D4O60343 1298 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GFAPP14136 432 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ATP5C1P36542 298 aaKnown RBP18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ADARP55265 1226 aaKnown RBP18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 NFKB2Q00653 900 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MAPRE2Q15555 327 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PAQR3Q6TCH7 311 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CLYBLQ8N0X4 340 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MDGA1Q8NFP4 955 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TRPC4APQ8TEL6 797 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ZBED2Q9BTP6 218 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 UNC93B1Q9H1C4 597 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 DNMT3LQ9UJW3 386 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 IKZF3Q9UKT9 509 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MOXD2PA6NHM9 499 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 C9JVG2 144 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MRASO14807 208 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MAGEB3O15480 346 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 DNAJA2O60884 412 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RNASEH2AO75792 299 aaKnown RBP18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 IL23RQ5VWK5 629 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GLT6D1Q7Z4J2 308 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PEX13Q92968 403 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ASB9Q96DX5 294 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PRICKLE1Q96MT3 831 aaPredicted RBP18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ATOH8Q96SQ7 321 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GKN1Q9NS71 199 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 UBA2Q9UBT2 640 aaPredicted RBP18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PCDHGB4Q9UN71 923 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MED16Q9Y2X0 877 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PCDHGB5Q9Y5G0 923 aa18.28■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PRSS51A0A1B0GVH4 220 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RHOBTB1O94844 696 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PABPC4LP0CB38 370 aaKnown RBP18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SUOXP51687 545 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TRIM25Q14258 630 aaKnown RBP18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TCTN1Q2MV58 587 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PITRM1Q5JRX3 1037 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FUNDC1Q8IVP5 155 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GALNT4Q8N4A0 578 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 BTBD9Q96Q07 612 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PSKH2Q96QS6 385 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MAGEH1Q9H213 219 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GALPQ9UBC7 116 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SEPT3Q9UH03 358 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PCDHGC4Q9Y5F7 938 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CHD5Q8TDI0 1954 aa18.27■□□□□ 0.52
CHRFAM7A-202ENST00000397827 H3BNC9 293 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CBX4O00257 560 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PIP5K1BO14986 540 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NRP2O60462 931 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 OR6B1O95007 311 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GALTP07902 379 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ZNF140P52738 457 aaPredicted RBP18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 KIF19Q2TAC6 998 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SLC44A4Q53GD3 710 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SETMARQ53H47 684 aaPredicted RBP18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CCDC92Q53HC0 331 aaPredicted RBP18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CYP2R1Q6VVX0 501 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 BBS5Q8N3I7 341 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 DLG3Q92796 817 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ZNF599Q96NL3 588 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TTPALQ9BTX7 342 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GMPR2Q9P2T1 348 aaKnown RBP18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LRFN2Q9ULH4 789 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ZNF711Q9Y462 761 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LAMA3Q16787 3333 aa18.27■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SCAMP3O14828 347 aaKnown RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TSPAN3O60637 253 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 KLKB1P03952 638 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SELPP16109 830 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 OGNP20774 298 aaKnown RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GALK1P51570 392 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 KPNA1P52294 538 aaPredicted RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 OXCT1P55809 520 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TYSND1Q2T9J0 566 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ALG1LQ6GMV1 187 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 DDIASQ8IXT1 998 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TWIST2Q8WVJ9 160 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SLC45A3Q96JT2 553 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SLC25A23Q9BV35 468 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SPAG4Q9NPE6 437 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NLE1Q9NVX2 485 aaPredicted RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 BTRCQ9Y297 605 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NCF1BA6NI72 391 aaPredicted RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NCF1CA8MVU1 366 aaPredicted RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SUPT3HB4E1H0 165 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 INSIG1O15503 277 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CLASP2O75122 1294 aaKnown RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SRP72O76094 671 aaKnown RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CRTAMO95727 393 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PRLP01236 227 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NCF1P14598 390 aaPredicted RBP18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GRIA2P42262 883 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GRB7Q14451 532 aa18.26■□□□□ 0.51
CHRFAM7A-202ENST00000397827 UGT2A3Q6UWM9 527 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms