RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 NRP1O14786 923 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 MED7O43513 233 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 HS6ST1O60243 411 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SLC16A8O95907 504 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 S100A6P06703 90 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 NFICP08651 508 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 C8orf89P0DMQ9 161 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 HSPA8P11142 646 aaKnown RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 FDXRP22570 491 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 CHMLP26374 656 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 MGAT1P26572 445 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 MAP4P27816 1152 aaKnown RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 CORO1AP31146 461 aaKnown RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 CA8P35219 290 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 THBS4P35443 961 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 CDKN1AP38936 164 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SPIBQ01892 262 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 ARHGAP19Q14CB8 494 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 XKR3Q5GH77 459 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 DAB2IPQ5VWQ8 1189 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 MIS18BP1Q6P0N0 1132 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SEPT14Q6ZU15 432 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 PRRT2Q7Z6L0 340 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 REXO1L1PQ8IX06 675 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 C16orf71Q8IYS4 520 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 BATF2Q8N1L9 274 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 CFAP61Q8NHU2 1237 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 MBD3L2Q8NHZ7 208 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 ASB11Q8WXH4 323 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 PHF21BQ96EK2 531 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 HES6Q96HZ4 224 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 PWWP2AQ96N64 755 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 PSKH2Q96QS6 385 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 JMJD8Q96S16 334 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 ZBTB18Q99592 522 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 ZNF577Q9BSK1 485 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 OR10A5Q9H207 317 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 GCM1Q9NP62 436 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 THAP1Q9NVV9 213 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 HDAC6Q9UBN7 1215 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SIT1Q9Y3P8 196 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 ATRNL1Q5VV63 1379 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 IBTKQ9P2D0 1353 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 C2orf92A0A1B0GVN3 265 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 GXYLT2A0PJZ3 443 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SH3D21A4FU49 640 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 MBD3L5A6NJ08 208 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SLC16A3O15427 465 aaKnown RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SCGB2A1O75556 95 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 ITGA10O75578 1167 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 GDF11O95390 407 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 RALAP11233 206 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 PNLIPP16233 465 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 ENDOUP21128 410 aaKnown RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 ACP1P24666 158 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 BMI1P35226 326 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SMCPP49901 116 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 NAGLUP54802 743 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 OLIG2Q13516 323 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 BYSLQ13895 437 aaKnown RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 RCN1Q15293 331 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 PCGF3Q3KNV8 242 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 NADK2Q4G0N4 442 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 CFAP157Q5JU67 520 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SULT1C3Q6IMI6 304 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 TSSK4Q6SA08 328 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 WDR88Q6ZMY6 472 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 C22orf34Q6ZV56 151 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 ACAD11Q709F0 780 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 DMRTC2Q8IXT2 367 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 GUF1Q8N442 669 aaKnown RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 Q8NA96 180 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 HUS1BQ8NHY5 278 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 RAB40AQ8WXH6 277 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 CNOT9Q92600 299 aaKnown RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 GTF3C6Q969F1 213 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 DTD2Q96FN9 168 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 EEF2KMTQ96G04 330 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 FCRL2Q96LA5 508 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 PRMT7Q9NVM4 692 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SPATA6Q9NWH7 488 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-201ENST00000397537 STK39Q9UEW8 545 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 PALD1Q9ULE6 856 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 EXOC6BQ9Y2D4 811 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 COMMD3-BMI1R4GMX3 469 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 SSH2Q76I76 1423 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 NRXN1Q9ULB1 1477 aa6.78□□□□□ -1.32
SMCO1-201ENST00000397537 LOC100653049A0A140TA62 436 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 TCRBV7S2A1N4TA0A589 114 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 TCAF2A6NFQ2 919 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 NPIPB13A6NJU9 1138 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 NPIPB4C9JG80 1138 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 AGPSO00116 658 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 PLK4O00444 970 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 ATP2A1O14983 1001 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 NVLO15381 856 aaKnown RBP6.77□□□□□ -1.33
SMCO1-201ENST00000397537 CLDN3O15551 220 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 RHBDL1O75783 438 aa6.77□□□□□ -1.33
SMCO1-201ENST00000397537 KRT34O76011 436 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms