RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 FUBP3Q96I24 572 aaKnown RBP eCLIP11.13□□□□□ -0.63
IFT140-202ENST00000397417 WDR41Q9HAD4 459 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 U3KQV3 271 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 TTC3P53804 2025 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 YBEYP58557 167 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 KLC1Q07866 573 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 VAC14Q08AM6 782 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 SIRPB2Q5JXA9 342 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 TBCELQ5QJ74 424 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 SNAP47Q5SQN1 464 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 LIPMQ5VYY2 423 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 AFTPHQ6ULP2 937 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 SERPINA9Q86WD7 417 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 FAM120BQ96EK7 910 aaKnown RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 CROTQ9UKG9 612 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 STARD13Q9Y3M8 1113 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 CCDC154A6NI56 674 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 ULK1O75385 1050 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 ANXA5P08758 320 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 RPL10P27635 214 aaKnown RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 TIE1P35590 1138 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 PPIDQ08752 370 aaKnown RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 WASHC5Q12768 1159 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 ARSIQ5FYB1 569 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 FAM45BPQ6NSW5 357 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 ARMC6Q6NXE6 501 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 CHST15Q7LFX5 561 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 RALGPS2Q86X27 583 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 PARP8Q8N3A8 854 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 VPS37AQ8NEZ2 397 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 BHLHE22Q8NFJ8 381 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 FAM45AQ8TCE6 357 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 SIGLEC10Q96LC7 697 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 APOLD1Q96LR9 279 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 LENG8Q96PV6 779 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 SLC39A3Q9BRY0 314 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 RCOR3Q9P2K3 495 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 NDOR1Q9UHB4 597 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 TRAF6Q9Y4K3 522 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 INSL5Q9Y5Q6 135 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 AURKAO14965 403 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 ERAL1O75616 437 aaKnown RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 RPP40O75818 363 aaKnown RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 CYP2A7P20853 494 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 CHI3L1P36222 383 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 GABRB2P47870 512 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 SLC16A1P53985 500 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 DAB2P98082 770 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 PPP1R8Q12972 351 aaKnown RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 NAE1Q13564 534 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 MPPE1Q53F39 396 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 XKR6Q5GH73 641 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 DEFB119Q8N690 84 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 RBM15BQ8NDT2 890 aaKnown RBP11.13□□□□□ -0.63
IFT140-202ENST00000397417 IRGQQ8WZA9 623 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 PANX3Q96QZ0 392 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 TRIM8Q9BZR9 551 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 CCDC134Q9H6E4 229 aa11.13□□□□□ -0.63
IFT140-202ENST00000397417 CACNA1CQ13936 2221 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 SAP18O00422 153 aaKnown RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 PCCBP05166 539 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 PTPN2P17706 415 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 CDH4P55283 916 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 KCNJ11Q14654 390 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 VPS26BQ4G0F5 336 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 PLEKHG4Q58EX7 1191 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 ZNF648Q5T619 568 aaPredicted RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 PIK3R6Q5UE93 754 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 CAPRIN2Q6IMN6 1127 aaKnown RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 UBE2R2Q712K3 238 aaPredicted RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 SLC9A7Q96T83 725 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 MRPL57Q9BQC6 102 aaKnown RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 PHACTR1Q9C0D0 580 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 NOL11Q9H8H0 719 aaKnown RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 DPP7Q9UHL4 492 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 HBS1LQ9Y450 684 aaKnown RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 TEX264Q9Y6I9 313 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 THSD7AQ9UPZ6 1657 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 KIF1CO43896 1103 aaKnown RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 OR4F21O95013 312 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 CATP04040 527 aaKnown RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 DGKAP23743 735 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 BNIP1Q12981 228 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 ZBTB49Q6ZSB9 765 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 SYT12Q8IV01 421 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 DCAKDQ8WVC6 231 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 APBB2Q92870 758 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 FCRL3Q96P31 734 aaPredicted RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 INSL6Q9Y581 213 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 ZNF831Q5JPB2 1677 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 PLK4O00444 970 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 OR1I1O60431 355 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 DGKGP49619 791 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 SLC7A2P52569 658 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 FBXW4P57775 412 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 SLC9A4Q6AI14 798 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 BANPQ8N9N5 519 aa11.12□□□□□ -0.63
IFT140-202ENST00000397417 ZNF784Q8NCA9 323 aaPredicted RBP11.12□□□□□ -0.63
IFT140-202ENST00000397417 MAGEC3Q8TD91 643 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms