RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CDH16O75309 829 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 FAM155BO75949 473 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 SYF2O95926 243 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 DNTTP04053 509 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 GM2AP17900 193 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 NDUFV2P19404 249 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 FOXN2P32314 431 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 MSH2P43246 934 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 SPINT3P49223 89 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 TAS2R38P59533 333 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 ZBTB16Q05516 673 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 THOC5Q13769 683 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 AFTPHQ6ULP2 937 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 RFLNAQ6ZTI6 216 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 HSD11B1LQ7Z5J1 315 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 PTAR1Q7Z6K3 402 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 KBTBD6Q86V97 674 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 SLC26A11Q86WA9 606 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 RIBC1Q8N443 379 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 GPR150Q8NGU9 434 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 OR4L1Q8NH43 312 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 CALML6Q8TD86 181 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 SIPA1Q96FS4 1042 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 MARCH4Q9P2E8 410 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 PSMC3IPQ9P2W1 217 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 SCML1Q9UN30 329 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 CCDC163A0A0D9SF12 145 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 TCRBV21S2A2A0A5A6 115 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 PSMD11O00231 422 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 OPA1O60313 960 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 ATG13O75143 517 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 RETP07949 1114 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 INHBAP08476 426 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 ELFN1P0C7U0 828 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 GABRG2P18507 467 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 MC4RP32245 332 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 CNR2P34972 360 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 SPAM1P38567 509 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 SLC1A2P43004 574 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 LIG3P49916 1009 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 RSPO4Q2I0M5 234 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 ZNF470Q6ECI4 717 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 PACS1Q6VY07 963 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 CILP2Q8IUL8 1156 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 DENND6AQ8IWF6 608 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 LMNTD2Q8IXW0 634 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 CYP4X1Q8N118 509 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 C2CD4AQ8NCU7 369 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 GPR26Q8NDV2 337 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 GAB3Q8WWW8 586 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 CPNE1Q99829 537 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 MCMBPQ9BTE3 642 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 IL26Q9NPH9 171 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 NSMCE4AQ9NXX6 385 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 PKD2L2Q9NZM6 624 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 ZNF180Q9UJW8 692 aa16.87■□□□□ 0.29
TSPAN4-205ENST00000397406 TRPM6Q9BX84 2022 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 CD3EAPO15446 510 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 RNASEH2AO75792 299 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 F7P08709 466 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 MYZAPP0CAP1 466 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 PRSS56P0CW18 603 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 GP5P40197 560 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 DGKEP52429 567 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 CCDC15Q0P6D6 951 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 CTBP1Q13363 440 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 SEMA3AQ14563 771 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 TTC31Q49AM3 519 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 TNFAIP8L3Q5GJ75 292 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 TECPR1Q7Z6L1 1165 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 STRA8Q7Z7C7 330 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 RAVER1Q8IY67 606 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 CAMKK1Q8N5S9 505 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 ARL8AQ96BM9 186 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 PGM2Q96G03 612 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 COQ10AQ96MF6 247 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 PLEKHG4BQ96PX9 1271 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 OMDQ99983 421 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 WRAP53Q9BUR4 548 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 POLMQ9NP87 494 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 CATSPERZQ9NTU4 200 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 FBXL12Q9NXK8 326 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 NFKBIL1Q9UBC1 381 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 APPL1Q9UKG1 709 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 FBXO5Q9UKT4 447 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 FNDC3AQ9Y2H6 1198 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 IKBKGQ9Y6K9 419 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 DOCK9Q9BZ29 2069 aa16.86■□□□□ 0.29
TSPAN4-205ENST00000397406 CACNA1AO00555 2505 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 NUMA1Q14980 2115 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 GOLGA6L10A6NI86 522 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 SRP72O76094 671 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 OGNP20774 298 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 GABRB3P28472 473 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 CSE1LP55060 971 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 DCDC1P59894 354 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 MPP1Q00013 466 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 CREB5Q02930 508 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 TMED2Q15363 201 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms