RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 FAM87AP0C7U9 286 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 GP1BBP13224 206 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 TSHRP16473 764 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 RBL1P28749 1068 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 GARSP41250 739 aaKnown RBP13.69□□□□□ -0.22
SEC13-205ENST00000397101 FNTAP49354 379 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 CCNHP51946 323 aaPredicted RBP13.69□□□□□ -0.22
SEC13-205ENST00000397101 NFKB2Q00653 900 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 UBAP2LQ14157 1087 aaKnown RBP13.69□□□□□ -0.22
SEC13-205ENST00000397101 ELOCQ15369 112 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 PPP1R7Q15435 360 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 TGIF1Q15583 401 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 TBR1Q16650 682 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 MANEAQ5SRI9 462 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 LINGO4Q6UY18 593 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 ARHGAP36Q6ZRI8 547 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 B3GNT8Q7Z7M8 397 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 DTX1Q86Y01 620 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 LRRC49Q8IUZ0 686 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 CCDC13Q8IYE1 715 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 CCDC89Q8N998 374 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 ARHGEF2Q92974 986 aaKnown RBP13.69□□□□□ -0.22
SEC13-205ENST00000397101 GFM1Q96RP9 751 aaKnown RBP13.69□□□□□ -0.22
SEC13-205ENST00000397101 TMEM121Q9BTD3 319 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 KLC2Q9H0B6 622 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 TCEAL2Q9H3H9 227 aaPredicted RBP13.69□□□□□ -0.22
SEC13-205ENST00000397101 EPB41L5Q9HCM4 733 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 ZNF212Q9UDV6 495 aa13.69□□□□□ -0.22
SEC13-205ENST00000397101 PNMA8BQ9ULN7 279 aaPredicted RBP13.69□□□□□ -0.22
SEC13-205ENST00000397101 A0A1W2PQM1 296 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 CLEC18AA5D8T8 446 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 CFAP69A5D8W1 941 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.68□□□□□ -0.22
SEC13-205ENST00000397101 AREL1O15033 823 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 CASC3O15234 703 aaKnown RBP13.68□□□□□ -0.22
SEC13-205ENST00000397101 KDELR3O43731 214 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 ZNF189O75820 626 aaPredicted RBP13.68□□□□□ -0.22
SEC13-205ENST00000397101 ECEL1O95672 775 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 GAS8O95995 478 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 ALPIP09923 528 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 JMJD7P0C870 316 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 CCNCP24863 283 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 DR1Q01658 176 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 PPARDQ03181 441 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 TLE1Q04724 770 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 ZFP36L1Q07352 338 aaKnown RBP13.68□□□□□ -0.22
SEC13-205ENST00000397101 SERINC3Q13530 473 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 C1orf61Q13536 156 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 CYP1B1Q16678 543 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 ZNF805Q5CZA5 627 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 TEX35Q5T0J7 233 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 AFMIDQ63HM1 303 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 C8orf74Q6P047 294 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 CLEC18BQ6UXF7 455 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 LEKR1Q6ZMV7 388 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 ZNF572Q7Z3I7 529 aaPredicted RBP13.68□□□□□ -0.22
SEC13-205ENST00000397101 JAMLQ86YT9 394 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 BBS5Q8N3I7 341 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 CLEC18CQ8NCF0 446 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 SLC35B2Q8TB61 432 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 HTR3CQ8WXA8 447 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 HDAC11Q96DB2 347 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 OLFM3Q96PB7 478 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 QKIQ96PU8 341 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEC13-205ENST00000397101 C1QTNF7Q9BXJ2 289 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 LRRN3Q9H3W5 708 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 NOL6Q9H6R4 1146 aaKnown RBP13.68□□□□□ -0.22
SEC13-205ENST00000397101 APPL1Q9UKG1 709 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 DRG1Q9Y295 367 aaKnown RBP13.68□□□□□ -0.22
SEC13-205ENST00000397101 PCDHB11Q9Y5F2 797 aa13.68□□□□□ -0.22
SEC13-205ENST00000397101 C16orf96A6NNT2 1141 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 J3KR12 359 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 MTSS1O43312 755 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 PNLIPP16233 465 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 STIP1P31948 543 aaKnown RBP13.67□□□□□ -0.22
SEC13-205ENST00000397101 IGFALSP35858 605 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 ABL2P42684 1182 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 HK3P52790 923 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 ARF5P84085 180 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 IL10RBQ08334 325 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 PPIDQ08752 370 aaKnown RBP13.67□□□□□ -0.22
SEC13-205ENST00000397101 ITKQ08881 620 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 SRSF6Q13247 344 aaKnown RBP13.67□□□□□ -0.22
SEC13-205ENST00000397101 TRIP13Q15645 432 aaPredicted RBP13.67□□□□□ -0.22
SEC13-205ENST00000397101 FAXCQ5TGI0 409 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 TTC27Q6P3X3 843 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 DRICH1Q6PGQ1 229 aaPredicted RBP13.67□□□□□ -0.22
SEC13-205ENST00000397101 MAATS1Q7Z4T9 603 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 FAM71DQ8N9W8 422 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 CCDC74AQ96AQ1 378 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 CMKLR1Q99788 373 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 OSBPL1AQ9BXW6 950 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 HECAQ9UBI9 543 aaPredicted RBP13.67□□□□□ -0.22
SEC13-205ENST00000397101 UBA2Q9UBT2 640 aaPredicted RBP13.67□□□□□ -0.22
SEC13-205ENST00000397101 AMACRQ9UHK6 382 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 RABGEF1Q9UJ41 708 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 TUBD1Q9UJT1 453 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 DOLKQ9UPQ8 538 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 LOXL2Q9Y4K0 774 aa13.67□□□□□ -0.22
SEC13-205ENST00000397101 TTLL3Q9Y4R7 772 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms