RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ALPK1Q96QP1 1244 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 FUNDC2Q9BWH2 189 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 TKTL2Q9H0I9 626 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ADAMTS10Q9H324 1103 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 MARCH7Q9H992 704 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 SEMA4BQ9NPR2 832 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 BAG5Q9UL15 447 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 FNDC3AQ9Y2H6 1198 aaKnown RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ZNF701M0R085 212 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 PSMD11O00231 422 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 NDUFB5O43674 189 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 INMTO95050 263 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 IGHA2P01877 340 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 CYP2C8P10632 490 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 MBL2P11226 248 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 IDO1P14902 403 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 PRKACGP22612 351 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 FSHRP23945 695 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 RFC2P35250 354 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ACADVLP49748 655 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 SEPHS1P49903 392 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 KPNA2P52292 529 aaKnown RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 AQP6Q13520 282 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 SF3B4Q15427 424 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 OTUD1Q5VV17 481 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 IQSEC1Q6DN90 963 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 RNF19BQ6ZMZ0 732 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 LARP4Q71RC2 724 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ZCCHC7Q8N3Z6 543 aaKnown RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 DNERQ8NFT8 737 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 OR13F1Q8NGS4 319 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 BIRC7Q96CA5 298 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 SH3YL1Q96HL8 342 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 FAR2Q96K12 515 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 PPM1MQ96MI6 270 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 SLC30A3Q99726 388 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 SMARCAD1Q9H4L7 1026 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 WDCPQ9H6R7 721 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ITM2CQ9NQX7 267 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 NSMCE4AQ9NXX6 385 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 KLQ9UEF7 1012 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 NUDT5Q9UKK9 219 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 TMA7Q9Y2S6 64 aaKnown RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 DNAJC15Q9Y5T4 150 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 SNX5Q9Y5X3 404 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 U3KQV3 271 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ZFC3H1O60293 1989 aaKnown RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 AQP12BA6NM10 295 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ERI2A8K979 691 aaKnown RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 AXIN1O15169 862 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 HBP1O60381 514 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 CLASP2O75122 1294 aaKnown RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 NADKO95544 446 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ALDH2P05091 517 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 PABPC1P11940 636 aaKnown RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 TCEA1P23193 301 aaKnown RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ARNTP27540 789 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 MAXP61244 160 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 YWHAHQ04917 246 aaPredicted RBP9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ARHGEF6Q15052 776 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 INAQ16352 499 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 UGT3A2Q3SY77 523 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 TECRLQ5HYJ1 363 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 PAGE3Q5JUK9 113 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ZNF773Q6PK81 442 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 CYHR1Q6ZMK1 362 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 GADL1Q6ZQY3 521 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 AQP12AQ8IXF9 295 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 BEST2Q8NFU1 509 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 OR10Q1Q8NGQ4 319 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 FBXO30Q8TB52 745 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 TWIST2Q8WVJ9 160 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 TEX37Q96LM6 180 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 IL12RB2Q99665 862 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 RHOBTB2Q9BYZ6 727 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ABCB10Q9NRK6 738 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 ACTR3BQ9P1U1 418 aa9.81□□□□□ -0.84
TRIM39-203ENST00000396547 IGKV6-21A0A0C4DH24 114 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 ZNF487B1APH4 448 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 UBXN8O00124 270 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 AP3B1O00203 1094 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 LRIG2O94898 1065 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 MOCS2O96007 188 aaPredicted RBP9.8□□□□□ -0.84
TRIM39-203ENST00000396547 TCF3P15923 654 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 ACADSBP45954 432 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 ATP6V0D1P61421 351 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 GALNT2Q10471 571 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 SLC13A2Q13183 592 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 PTPRCAPQ14761 206 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 CELF3Q5SZQ8 465 aaKnown RBP9.8□□□□□ -0.84
TRIM39-203ENST00000396547 CCDC80Q76M96 950 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 CATSPER4Q7RTX7 472 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 ADCK1Q86TW2 530 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 PACRGLQ8N7B6 248 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 SCAIQ8N9R8 606 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 APPL2Q8NEU8 664 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 PSMA8Q8TAA3 256 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 ELMO1Q92556 727 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 ZUFSPQ96AP4 578 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 FEM1CQ96JP0 617 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms