RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 GALNT3Q14435 633 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 HLTFQ14527 1009 aaKnown RBP eCLIP13.67□□□□□ -0.22
CXCL12-205ENST00000395794 PCSK7Q16549 785 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 TEX44Q53QW1 395 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 CCDC181Q5TID7 509 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 BROXQ5VW32 411 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 C11orf63Q6NUN7 778 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 MARK2Q7KZI7 788 aaKnown RBP13.67□□□□□ -0.22
CXCL12-205ENST00000395794 KATNAL2Q8IYT4 538 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 FERMT1Q9BQL6 677 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 RBSNQ9H1K0 784 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 ZFYVE1Q9HBF4 777 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 GLOD4Q9HC38 313 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 EPB41L5Q9HCM4 733 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 SPATS2LQ9NUQ6 558 aaKnown RBP13.67□□□□□ -0.22
CXCL12-205ENST00000395794 ZNHIT2Q9UHR6 403 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 RABGEF1Q9UJ41 708 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 EPN1Q9Y6I3 576 aaPredicted RBP13.67□□□□□ -0.22
CXCL12-205ENST00000395794 RNF215Q9Y6U7 377 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 LRRK1Q38SD2 2015 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 SHROOM3Q8TF72 1996 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 D6RAR5 112 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 NDUFA10O95299 355 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 SOD1P00441 154 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 FUCA1P04066 466 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 FGF1P05230 155 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 AK4P27144 223 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-205ENST00000395794 ITPKBP27987 946 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 CETN2P41208 172 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 ACTR1BP42025 376 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 MLLT3P42568 568 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-205ENST00000395794 ACTR1AP61163 376 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 PRKD1Q15139 912 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-205ENST00000395794 LLGL1Q15334 1064 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 SLC14A2Q15849 920 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 TAZQ16635 292 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 IGF2-ASQ6U949 168 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 B4GALNT4Q76KP1 1039 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 LYSMD3Q7Z3D4 306 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 TRIM74Q86UV6 250 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 CCDC97Q96F63 343 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-205ENST00000395794 TEKT5Q96M29 485 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 SLC46A1Q96NT5 459 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 AGAP2Q99490 1192 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 GPR63Q9BZJ6 419 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 GOLPH3Q9H4A6 298 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 MAGEE1Q9HCI5 957 aa13.66□□□□□ -0.22
CXCL12-205ENST00000395794 KLHL8Q9P2G9 620 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-205ENST00000395794 SAE1Q9UBE0 346 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-205ENST00000395794 A0A1W2PQM1 296 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 PMPCBO75439 489 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 TNFSF15O95150 251 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 ECEL1O95672 775 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 NDST3O95803 873 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 SLC4A1P02730 911 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 PTPN3P26045 913 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 ALDH4A1P30038 563 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 MAP9Q49MG5 647 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 PYCR3Q53H96 274 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 RAB11FIP2Q7L804 512 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 SPRED1Q7Z699 444 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 ZC3H18Q86VM9 953 aaKnown RBP13.65□□□□□ -0.22
CXCL12-205ENST00000395794 NRROSQ86YC3 692 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 FBXO39Q8N4B4 442 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 SPATA22Q8NHS9 363 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 KCNE4Q8WWG9 221 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 SCARF2Q96GP6 870 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-205ENST00000395794 LIN37Q96GY3 246 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-205ENST00000395794 NAF1Q96HR8 494 aaKnown RBP13.65□□□□□ -0.22
CXCL12-205ENST00000395794 COX14Q96I36 57 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 VAT1Q99536 393 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 SPATA16Q9BXB7 569 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 FOXP3Q9BZS1 431 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 RMI1Q9H9A7 625 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 AKAP7Q9P0M2 348 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-205ENST00000395794 VPS18Q9P253 973 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 TFR2Q9UP52 801 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 SHOC2Q9UQ13 582 aa13.65□□□□□ -0.22
CXCL12-205ENST00000395794 KNTC1P50748 2209 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 hCG_1818297A0A087WSY0 165 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 SOWAHDA6NJG2 315 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 HACD1B0YJ81 288 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 PLD2O14939 933 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 MT-CYBP00156 380 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-205ENST00000395794 ATP1A1P05023 1023 aaKnown RBP13.64□□□□□ -0.23
CXCL12-205ENST00000395794 JMJD7P0C870 316 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 PECAM1P16284 738 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-205ENST00000395794 CCKBRP32239 447 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 PPM1FP49593 454 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-205ENST00000395794 UCNP55089 124 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 MAZP56270 477 aaKnown RBP13.64□□□□□ -0.23
CXCL12-205ENST00000395794 COPS2P61201 443 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 AMZ1Q400G9 498 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 ZNF569Q5MCW4 686 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 HENMT1Q5T8I9 393 aaKnown RBP13.64□□□□□ -0.23
CXCL12-205ENST00000395794 ALS2CLQ60I27 953 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 PID1Q7Z2X4 250 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 KIAA1328Q86T90 577 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 PIM3Q86V86 326 aa13.64□□□□□ -0.23
CXCL12-205ENST00000395794 SFTPA2Q8IWL1 248 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms