RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PTGES3LE9PB15 166 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 EI24O14681 340 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 KRT6AP02538 564 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 KRT6BP04259 564 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 OGNP20774 298 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 CAPGP40121 348 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 PBX3P40426 434 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 KRT6CP48668 564 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 PRKCQQ04759 706 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 FAM171A1Q5VUB5 890 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ADHFE1Q8IWW8 467 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 OR4K2Q8NGD2 314 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 RNF217Q8TC41 542 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 GLMNQ92990 594 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 PPP3R2Q96LZ3 170 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 DACH2Q96NX9 599 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 DGCR6LQ9BY27 220 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 MEAF6Q9HAF1 191 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 PREBQ9HCU5 417 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 AP3M1Q9Y2T2 418 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 TCAF2A6NFQ2 919 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 SEC22BO75396 215 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ZNF682O95780 498 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 PKMP14618 531 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ATP4BP51164 291 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 SLC10A7Q0GE19 358 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 MAPKAPK3Q16644 382 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 KCTD21Q4G0X4 260 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 FBXL19Q6PCT2 694 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 PIM3Q86V86 326 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 CILP2Q8IUL8 1156 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 LRRC58Q96CX6 371 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 EXOC2Q96KP1 924 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 CEP19Q96LK0 163 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 PPM1MQ96MI6 270 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 FAM210AQ96ND0 272 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 GPR21Q99679 349 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 EPB41L1Q9H4G0 881 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 TFB2MQ9H5Q4 396 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ZFYVE28Q9HCC9 887 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ACTR3BQ9P1U1 418 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 FNIP2Q9P278 1114 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 OAZ3Q9UMX2 235 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 INVSQ9Y283 1065 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 SCN4AP35499 1836 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 TSNQ15631 228 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 CST9Q5W186 159 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 SPESP1Q6UW49 350 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 CHSY3Q70JA7 882 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ANKRD23Q86SG2 305 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ADAMTSL2Q86TH1 951 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ZNF554Q86TJ5 538 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 MICU2Q8IYU8 434 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 PHC3Q8NDX5 983 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ACVR1CQ8NER5 493 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 PGAP3Q96FM1 320 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 CDK5RAP1Q96SZ6 601 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 IL12RB2Q99665 862 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 NUSAP1Q9BXS6 441 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 SMOC2Q9H3U7 446 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 GMIPQ9P107 970 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 OPTCQ9UBM4 332 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 RIMS3Q9UJD0 308 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 C3orf18Q9UK00 162 aa11.62□□□□□ -0.55
UBE2D3-209ENST00000394804 ARPC2O15144 300 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 PAPSS2O95340 614 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 UROSP10746 265 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 NCK1P16333 377 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 ZNF157P51786 506 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 MLLT6P55198 1093 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 IL10RBQ08334 325 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 ZBED5Q49AG3 693 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 HSF5Q4G112 596 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 PABPC1LQ4VXU2 614 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 ZBTB46Q86UZ6 589 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 SETD9Q8NE22 299 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 BRSK1Q8TDC3 778 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 RORBQ92753 470 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 ISL2Q96A47 359 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 CCDC162PA2VCL2 907 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 H3BMM5 538 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 KPNA4O00629 521 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 RECQL5O94762 991 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 MAPK1P28482 360 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 PCYT1AP49585 367 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 TOP3AQ13472 1001 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 ARHGEF7Q14155 803 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 ZNF678Q5SXM1 525 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 TMEM26Q6ZUK4 368 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 DRAXINQ8NBI3 349 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 TRPV3Q8NET8 790 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 SOCS4Q8WXH5 440 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 ZUFSPQ96AP4 578 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 KLHL32Q96NJ5 620 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 RAD21L1Q9H4I0 556 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 KLQ9UEF7 1012 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 PTBP2Q9UKA9 531 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 CITO14578 2027 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 H7C4K7 107 aa11.61□□□□□ -0.55
UBE2D3-209ENST00000394804 PENKP01210 267 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms