RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ELOVL4Q9GZR5 314 aa19.64■□□□□ 0.74
SHANK1-203ENST00000391813 PRDM8Q9NQV8 689 aa19.64■□□□□ 0.74
SHANK1-203ENST00000391813 ARL15Q9NXU5 204 aa19.64■□□□□ 0.74
SHANK1-203ENST00000391813 CBX4O00257 560 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 CARTPTQ16568 116 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 PPM1JQ5JR12 505 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 IZUMO1Q8IYV9 350 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 SLC38A2Q96QD8 506 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 TLR8Q9NR97 1041 aaKnown RBP19.64■□□□□ 0.73
SHANK1-203ENST00000391813 ZNF99A8MXY4 864 aaPredicted RBP19.64■□□□□ 0.73
SHANK1-203ENST00000391813 SUV39H1O43463 412 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 FTH1P02794 183 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 OR56A5P0C7T3 313 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 PCSK2P16519 638 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 RPL3P39023 403 aaKnown RBP19.64■□□□□ 0.73
SHANK1-203ENST00000391813 GMFBP60983 142 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 CRY1Q16526 586 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 RETSATQ6NUM9 610 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 SH3BP5LQ7L8J4 393 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 SLC26A9Q7LBE3 791 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 GATAD2AQ86YP4 633 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 ZNF420Q8TAQ5 688 aaPredicted RBP19.64■□□□□ 0.73
SHANK1-203ENST00000391813 PTGFRNQ9P2B2 879 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 VPS28Q9UK41 221 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 RFXANKO14593 260 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 BCAP31P51572 246 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 POLR2JP52435 117 aaKnown RBP19.64■□□□□ 0.73
SHANK1-203ENST00000391813 SIM2Q14190 667 aaPredicted RBP19.64■□□□□ 0.73
SHANK1-203ENST00000391813 RBM48Q5RL73 367 aaKnown RBP19.64■□□□□ 0.73
SHANK1-203ENST00000391813 ERICH5Q6P6B1 374 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 CNSTQ6PJW8 725 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 CCDC36Q8IYA8 594 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 PRELID1Q9Y255 219 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 ANGPT4Q9Y264 503 aa19.64■□□□□ 0.73
SHANK1-203ENST00000391813 KCPQ6ZWJ8 1503 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.63■□□□□ 0.73
SHANK1-203ENST00000391813 PMM2O15305 246 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 RECQL4O94761 1208 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 SCELO95171 688 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 CYP4B1P13584 511 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 CHRNB2P17787 502 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 ITGAXP20702 1163 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 NOS3P29474 1203 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 HNF4AP41235 474 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 CRATP43155 626 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 PEX6Q13608 980 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 DCAF12L1Q5VU92 463 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 KHDRBS2Q5VWX1 349 aaKnown RBP19.63■□□□□ 0.73
SHANK1-203ENST00000391813 AFTPHQ6ULP2 937 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 TMPRSS11AQ6ZMR5 421 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 LENG9Q96B70 501 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 TLL2Q9Y6L7 1015 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 KLHL18O94889 574 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 NTRK1P04629 796 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 SLURP2P0DP57 97 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 LIN54Q6MZP7 749 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 ZZZ3Q8IYH5 903 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 PHF12Q96QT6 1004 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 PDGFDQ9GZP0 370 aaPredicted RBP19.63■□□□□ 0.73
SHANK1-203ENST00000391813 SPACA6W5XKT8 324 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 PRKD3O94806 890 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 ITGB6P18564 788 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 THOP1P52888 689 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 IST1P53990 364 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 IRF8Q02556 426 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 BNIP3Q12983 259 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 LSAMPQ13449 338 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 VPS26BQ4G0F5 336 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 SMIM35A0A1B0GVV1 85 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 M0QX08 132 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 ZBTB14O43829 449 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 UGT2B4P06133 528 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 CAPZA2P47755 286 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 NPY5RQ15761 445 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 CCDC157Q569K6 752 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 ERAP2Q6P179 960 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 TUBA3EQ6PEY2 450 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 SPATA6LQ8N4H0 392 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 C7orf43Q8WVR3 580 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 GAD1Q99259 594 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 ZFP14Q9HCL3 533 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 COMMD9Q9P000 198 aa19.63■□□□□ 0.73
SHANK1-203ENST00000391813 ELOVL7A1L3X0 281 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 PRMT5O14744 637 aaPredicted RBP19.62■□□□□ 0.73
SHANK1-203ENST00000391813 TCF4P15884 667 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 RELL1Q8IUW5 271 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 IL31RAQ8NI17 732 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 SLC35B2Q8TB61 432 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 TP53INP1Q96A56 240 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 PANX1Q96RD7 426 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 THG1LQ9NWX6 298 aaKnown RBP19.62■□□□□ 0.73
SHANK1-203ENST00000391813 TOR4AQ9NXH8 423 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 PFDN2Q9UHV9 154 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 MRPS7Q9Y2R9 242 aaKnown RBP19.62■□□□□ 0.73
SHANK1-203ENST00000391813 PMF1-BGLAPU3KQ54 211 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 U3KQV3 271 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 SEPT4O43236 478 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 SDC2P34741 201 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 TGFBR2P37173 567 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 DLG2Q15700 870 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms