RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 EGFP01133 1207 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 CRYAAP02489 173 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 SP1P08047 785 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 CETPP11597 493 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 MYOD1P15172 320 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 CORO1AP31146 461 aaKnown RBP3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 ICAM3P32942 547 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 OLR1P78380 273 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 DCTN2Q13561 401 aaKnown RBP3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 RBBP5Q15291 538 aaKnown RBP3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 DECR1Q16698 335 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 DCST1Q5T197 706 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 GPATCH4Q5T3I0 446 aaKnown RBP3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 STPG1Q5TH74 334 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 METTL27Q8N6F8 245 aaPredicted RBP3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 SMARCE1Q969G3 411 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 PIGTQ969N2 578 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 TAAR8Q969N4 342 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 INTS12Q96CB8 462 aaKnown RBP3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 ORAI1Q96D31 301 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 MMABQ96EY8 250 aaPredicted RBP3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 QRFPRQ96P65 431 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 SYT17Q9BSW7 474 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 CSTL1Q9H114 145 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 SDF2L1Q9HCN8 221 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 ABCF3Q9NUQ8 709 aa3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 RALYQ9UKM9 306 aaKnown RBP3.55□□□□□ -1.84
SNORA40.3-201ENST00000390964 PTPRCP08575 1304 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 ARID4BQ4LE39 1312 aaPredicted RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 P2RY10O00398 339 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 FGF17O60258 216 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 TMEM63AO94886 807 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 ATP1A1P05023 1023 aaKnown RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 ATP1A3P13637 1013 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 KRT10P13645 584 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 ITGA2P17301 1181 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 CD53P19397 219 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 UBA1P22314 1058 aaKnown RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 BSGP35613 385 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 TMEM115Q12893 351 aaPredicted RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 CSTF3Q12996 717 aaKnown RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 ZNF234Q14588 700 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 ZNF280DQ6N043 979 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 GSG1LQ6UXU4 331 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 TRMT1LQ7Z2T5 733 aaKnown RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 DSG4Q86SJ6 1040 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 NRROSQ86YC3 692 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 DIS3L2Q8IYB7 885 aaKnown RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 CCDC13Q8IYE1 715 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 CNTROBQ8N137 903 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 KBTBD3Q8NAB2 608 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 IL17RCQ8NAC3 791 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 PCYOX1LQ8NBM8 494 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 OR13A1Q8NGR1 328 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 BBS10Q8TAM1 723 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 ETNPPLQ8TBG4 499 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 SGCDQ92629 289 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 APBB2Q92870 758 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 RHBDF1Q96CC6 855 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 RRNAD1Q96FB5 475 aaKnown RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 GRAMD2BQ96HH9 432 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 SEBOXQ9HB31 216 aaPredicted RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 SCPEP1Q9HB40 452 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 FBRSL1Q9HCM7 1045 aaKnown RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 UBA2Q9UBT2 640 aaPredicted RBP3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 MAU2Q9Y6X3 613 aa3.54□□□□□ -1.84
SNORA40.3-201ENST00000390964 KCNN4O15554 427 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 WDR1O75083 606 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 JRKO75564 520 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 NKX2-2O95096 273 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 PLGP00747 810 aaPredicted RBP3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 SPARCP09486 303 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 IL7RP16871 459 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 PSMA4P25789 261 aaKnown RBP3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 MARK3P27448 753 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 ELF1P32519 619 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 UBA7P41226 1012 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 APOBEC1P41238 236 aaKnown RBP3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 FMO5P49326 533 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 CCR9P51686 369 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 TERF1P54274 439 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 TAS2R38P59533 333 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 PHEXP78562 749 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 ZBED6P86452 979 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 TBX2Q13207 712 aaPredicted RBP3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 GTF2H2Q13888 395 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 FRG1Q14331 258 aaKnown RBP3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 MYLK3Q32MK0 819 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 SOWAHCQ53LP3 525 aaPredicted RBP3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 C18orf63Q68DL7 685 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 TTI2Q6NXR4 508 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 GTF2H2CQ6P1K8 395 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 ASB18Q6ZVZ8 466 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 SLC9B2Q86UD5 537 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 NFE4Q86UQ8 179 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 SRBD1Q8N5C6 995 aaKnown RBP3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 TMEM116Q8NCL8 245 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 OR5R1Q8NH85 324 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 OR14L1PQ8NHC6 308 aa3.53□□□□□ -1.84
SNORA40.3-201ENST00000390964 DNAAF4Q8WXU2 420 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms