RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 TBC1D3HP0C7X1 549 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TUBG1P23258 451 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 IGFBP5P24593 272 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 RAB10P61026 200 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 FAPQ12884 760 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 LARS2Q15031 903 aaKnown RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 ALG10Q5BKT4 473 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 RNF43Q68DV7 783 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TBC1D3GQ6DHY5 549 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TBC1D3CQ6IPX1 549 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 FAM129CQ86XR2 697 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 C10orf107Q8IVU9 208 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TRMT2AQ8IZ69 625 aaKnown RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 TBC1D3Q8IZP1 549 aaPredicted RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 OR52J3Q8NH60 311 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 LRRN4Q8WUT4 740 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 CERS2Q96G23 380 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 LACRTQ9GZZ8 138 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ELOVL2Q9NXB9 296 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 MED11Q9P086 117 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 OR12D3Q9UGF7 316 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 PCDHGA10Q9Y5H3 936 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 KCNE2Q9Y6J6 123 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 FPGTO14772 594 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TRBC1P01850 177 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 MAXP61244 160 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 LIPEQ05469 1076 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 PRKCDQ05655 676 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 PRKG2Q13237 762 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 PUM1Q14671 1186 aaKnown RBP eCLIP5.85□□□□□ -1.47
RFX3-204ENST00000382004 SPIN3Q5JUX0 258 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 AADACL2Q6P093 401 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ACER1Q8TDN7 264 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 CRAMP1Q96RY5 1269 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 MRPL57Q9BQC6 102 aaKnown RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 ISCA1Q9BUE6 129 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TBC1D10AQ9BXI6 508 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ZNF226Q9NYT6 803 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 MYH10P35580 1976 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 SMAD9O15198 467 aaKnown RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 NARSO43776 548 aaKnown RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 BANF1O75531 89 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ZNF823P16415 610 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ASMTP46597 345 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 RRP1BQ14684 758 aaKnown RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 MINDY4Q4G0A6 757 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 KLHL26Q53HC5 615 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 CCNYL2Q5T2Q4 361 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 IDNKQ5T6J7 187 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TDRPQ86YL5 185 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 GHDCQ8N2G8 530 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 HDDC3Q8N4P3 179 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ZFP3Q96NJ6 502 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 OR51V1Q9H2C8 321 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 MRPS23Q9Y3D9 190 aaKnown RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 COMMD3-BMI1R4GMX3 469 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ARHGEF40Q8TER5 1519 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 CCDC163A0A0D9SF12 145 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 CACNB4O00305 520 aaPredicted RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 ENTPD5O75356 428 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 PPM1BO75688 479 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 HOXB8P17481 243 aaPredicted RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 HDCP19113 662 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 FUT4P22083 530 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 AHCYP23526 432 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 UQCRC1P31930 480 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ICAM3P32942 547 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 RIN1Q13671 783 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 PABPC1LQ4VXU2 614 aaKnown RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 BEND4Q6ZU67 534 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 PLCZ1Q86YW0 608 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 SLC22A15Q8IZD6 547 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 FAM47BQ8NA70 645 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TRAPPC12Q8WVT3 735 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TMEM68Q96MH6 324 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ARHGAP20Q9P2F6 1191 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ZNF490Q9ULM2 529 aaPredicted RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 CPSF1Q10570 1443 aaKnown RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 NPEPPSL1A6NEC2 478 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 EPHB6O15197 1021 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 NUAK1O60285 661 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 SLC22A3O75751 556 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 C22orf31O95567 290 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 CHRM5P08912 532 aaPredicted RBP5.85□□□□□ -1.47
RFX3-204ENST00000382004 GNAO1P09471 354 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ITPKAP23677 461 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 CXCR3P49682 368 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 LIPMQ5VYY2 423 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 ALLCQ8N6M5 410 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 OR10H4Q8NGA5 316 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TBCBQ99426 244 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 VAT1Q99536 393 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 TAPBPLQ9BX59 468 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 MSRAQ9UJ68 235 aa5.85□□□□□ -1.47
RFX3-204ENST00000382004 GOLGA4Q13439 2230 aaKnown RBP5.84□□□□□ -1.47
RFX3-204ENST00000382004 LOC100509620A0A075B734 347 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 FGF10O15520 208 aaPredicted RBP5.84□□□□□ -1.47
RFX3-204ENST00000382004 PIAS1O75925 651 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 VNN2O95498 520 aa5.84□□□□□ -1.47
RFX3-204ENST00000382004 RPLP2P05387 115 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms