RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 IGSF6O95976 241 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 LMNAP02545 664 aaKnown RBP19.15■□□□□ 0.66
GMDS-201ENST00000380805 JUNP05412 331 aaKnown RBP19.15■□□□□ 0.66
GMDS-201ENST00000380805 PYGLP06737 847 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 TCF3P15923 654 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 NCF2P19878 526 aaPredicted RBP19.15■□□□□ 0.66
GMDS-201ENST00000380805 CTNNB1P35222 781 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 PTGER3P43115 390 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 CDKN1CP49918 316 aaPredicted RBP19.15■□□□□ 0.66
GMDS-201ENST00000380805 EPHB1P54762 984 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 CACNG1Q06432 222 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 BCL2L1Q07817 233 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 OR4D1Q15615 310 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 CDKN3Q16667 212 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 PITRM1Q5JRX3 1037 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 CERS6Q6ZMG9 384 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 TPGS1Q6ZTW0 290 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 CAMK1DQ8IU85 385 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 AFAP1L2Q8N4X5 818 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 OR2AP1Q8NGE2 309 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 BHMTQ93088 406 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 ASB2Q96Q27 587 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 LYSMD1Q96S90 227 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 P2RY12Q9H244 342 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 MTIF3Q9H2K0 278 aaKnown RBP19.15■□□□□ 0.66
GMDS-201ENST00000380805 EBF2Q9HAK2 575 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 TLR9Q9NR96 1032 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 HCFC1R1Q9NWW0 138 aa19.15■□□□□ 0.66
GMDS-201ENST00000380805 EVLQ9UI08 416 aaPredicted RBP19.15■□□□□ 0.66
GMDS-201ENST00000380805 C5orf67F2Z3F1 127 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 SDHDO14521 159 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 ESR1P03372 595 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 PTPN2P17706 415 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 EPHA3P29320 983 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 FMO4P31512 558 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 BTKQ06187 659 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 PTPRNQ16849 979 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 CTSL3PQ5NE16 218 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 SWT1Q5T5J6 900 aaKnown RBP19.14■□□□□ 0.66
GMDS-201ENST00000380805 PLPP4Q5VZY2 271 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 PAQR3Q6TCH7 311 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 LYSMD3Q7Z3D4 306 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 CUZD1Q86UP6 607 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 NKAPQ8N5F7 415 aaKnown RBP19.14■□□□□ 0.66
GMDS-201ENST00000380805 ZNF557Q8N988 423 aaPredicted RBP19.14■□□□□ 0.66
GMDS-201ENST00000380805 RIN3Q8TB24 985 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 POF1BQ8WVV4 589 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 ATP13A3Q9H7F0 1226 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 MEAF6Q9HAF1 191 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 MRGBPQ9NV56 204 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 PLK2Q9NYY3 685 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 CCL26Q9Y258 94 aa19.14■□□□□ 0.66
GMDS-201ENST00000380805 CAPN8A6NHC0 703 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 SRCP12931 536 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 HNRNPLP14866 589 aaKnown RBP eCLIP19.14■□□□□ 0.657e-7■■□□□ 11.9
GMDS-201ENST00000380805 HLA-FP30511 346 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 PPARGP37231 505 aaPredicted RBP19.14■□□□□ 0.65
GMDS-201ENST00000380805 NAA20P61599 178 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 RAD51Q06609 339 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 HERC3Q15034 1050 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 PTPRRQ15256 657 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 UNC50Q53HI1 259 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 DGKKQ5KSL6 1271 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 STAG3L4Q8TBR4 150 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 ACTRT2Q8TDY3 377 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 ECHDC3Q96DC8 303 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 TUBGCP5Q96RT8 1024 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 C1QTNF3Q9BXJ4 246 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 OSBPL1AQ9BXW6 950 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 GPR63Q9BZJ6 419 aa19.14■□□□□ 0.65
GMDS-201ENST00000380805 GOLGA8QA0A0J9YX86 632 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 GOLGA8OA6NCC3 632 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 TMEM233B4DJY2 109 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 GOLGA8NF8WBI6 632 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 GAPDHSO14556 408 aaPredicted RBP19.13■□□□□ 0.65
GMDS-201ENST00000380805 TLL1O43897 1013 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 KLK8O60259 260 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 ENTPD5O75356 428 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 VPS26AO75436 327 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 TSPAN12O95859 305 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 POU2F2P09086 479 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 HNRNPA1P09651 372 aaKnown RBP eCLIP19.13■□□□□ 0.65
GMDS-201ENST00000380805 COX4I1P13073 169 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 PREPLQ4J6C6 727 aaPredicted RBP19.13■□□□□ 0.65
GMDS-201ENST00000380805 CHSY3Q70JA7 882 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 SCUBE1Q8IWY4 988 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 ULK2Q8IYT8 1036 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 TDHQ8IZJ6 230 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 PELI3Q8N2H9 469 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 TCEAL4Q96EI5 215 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 PHF21BQ96EK2 531 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 GPR21Q99679 349 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 RTKNQ9BST9 563 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 SHCBP1LQ9BZQ2 653 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 CEP44Q9C0F1 390 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 SMG9Q9H0W8 520 aaKnown RBP19.13■□□□□ 0.65
GMDS-201ENST00000380805 DCLRE1BQ9H816 532 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 BPIFA1Q9NP55 256 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 ZMYM5Q9UJ78 669 aa19.13■□□□□ 0.65
GMDS-201ENST00000380805 PPIL1Q9Y3C6 166 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms