RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GAD2Q05329 585 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 KLHL35Q6PF15 583 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 MTG1Q9BT17 334 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 LIPT1Q9Y234 373 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ORC5O43913 435 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PORP16435 677 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ETV4P43268 484 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 AGKQ53H12 422 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ISL2Q96A47 359 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SIGLEC10Q96LC7 697 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 MEAF6Q9HAF1 191 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 FAM49BQ9NUQ9 324 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 NOTOA8MTQ0 251 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 EBLN1P0CF75 366 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 TAS2R43P59537 309 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ST8SIA6P61647 398 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 NLRP8Q86W28 1048 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 TSPAN16Q9UKR8 245 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 INPP4BO15327 924 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 OXSR1O95747 527 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ACADMP11310 421 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 HLCSP50747 726 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF630Q2M218 657 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CHST9Q7L1S5 443 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 GPR180Q86V85 440 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 MS4A15Q8N5U1 240 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 B3GALNT2Q8NCR0 500 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 MS4A12Q9NXJ0 267 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 GNEQ9Y223 722 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 C17orf102A2RUQ5 167 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 TGM6O95932 706 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CDH1P12830 882 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 KCNA2P16389 499 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 NUP62P37198 522 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 FGL1Q08830 312 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 DOK7Q18PE1 504 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 KCTD20Q7Z5Y7 419 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ZBTB8BQ8NAP8 495 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ELMO3Q96BJ8 720 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 RHBDF1Q96CC6 855 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF358Q9NW07 568 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 RHOBTB1O94844 696 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 EHD3Q9NZN3 535 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 HOXD8P13378 290 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF781Q8N8C0 355 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PROX1Q92786 737 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 KLRG1Q96E93 195 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SNX27Q96L92 541 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 GPN1Q9HCN4 374 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PTPRAP18433 802 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PLK1P53350 603 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 LPIN1Q14693 890 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 OGFRL1Q5TC84 451 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF773Q6PK81 442 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CRTC3Q6UUV7 619 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SLC24A5Q71RS6 500 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CBARPQ8N350 705 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 GDPD1Q8N9F7 314 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 MOSPD2Q8NHP6 518 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 C12orf66Q96MD2 445 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 GLT1D1Q96MS3 346 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CORO1BQ9BR76 489 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 RAB11FIP5Q9BXF6 653 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 MRPS22P82650 360 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PLEKHN1Q494U1 663 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ARHGAP15Q53QZ3 475 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 RUNDC3AQ59EK9 446 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 FAM46CQ5VWP2 391 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PM20D1Q6GTS8 502 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 FBXO39Q8N4B4 442 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ZNHIT2Q9UHR6 403 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 AKAP8O43823 692 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SLC1A5Q15758 541 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 HGH1Q9BTY7 390 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 FOLH1BQ9HBA9 442 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SAGE1Q9NXZ1 904 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CAB39Q9Y376 341 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SERPINA4P29622 427 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 NUDT1P36639 197 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ALDH3A2P51648 485 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ATP6AP1Q15904 470 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 WDR36Q8NI36 951 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ISG20Q96AZ6 181 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 RUVBL1Q9Y265 456 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CYP7B1O75881 506 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ARL6IP5O75915 188 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CATP04040 527 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 GTF2H3Q13889 308 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SPIN4Q56A73 249 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PLET1Q6UQ28 207 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CCDC60Q8IWA6 550 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 NAT16Q8N8M0 369 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 LPIN3Q9BQK8 851 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 KLHL20Q9Y2M5 609 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CLDN9O95484 217 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PANX1Q96RD7 426 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 EIF3MQ7L2H7 374 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 GPALPP1Q8IXQ4 340 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SEMA4CQ9C0C4 833 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 FAM198AQ9UFP1 575 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms